Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC090136.1-201ENST00000520009 240 ntBASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 HIGD1AP10-201ENST00000527837 282 ntBASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 AC024224.1-201ENST00000538284 609 ntBASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 AC006270.2-201ENST00000578523 652 ntBASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 AC243312.2-201ENST00000623340 601 ntBASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.18□□□□□ -1.9
LRTM1Q9HBL6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC069218.2-201ENST00000411665 344 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 RPL5P24-201ENST00000463742 885 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 RN7SKP57-201ENST00000517248 293 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC006518.1-201ENST00000541449 943 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC087888.1-201ENST00000550884 1254 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 MIR3186-201ENST00000577404 85 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC006254.3-201ENST00000603353 884 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC009948.4-201ENST00000604692 675 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 MIR8058-201ENST00000615737 89 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 AC244258.1-201ENST00000637553 1071 ntBASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRTM1Q9HBL6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 RNA5SP293-201ENST00000410527 113 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 PRELID3BP11-201ENST00000414230 479 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AC006960.1-201ENST00000419980 153 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AL158156.1-201ENST00000422509 473 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 ELOCP6-201ENST00000429066 328 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 ELOCP12-201ENST00000458706 328 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 OR5B10P-201ENST00000532869 642 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 PDCL2P2-201ENST00000533651 189 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AP004242.1-201ENST00000533701 349 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 ZNF192P1-203ENST00000565888 810 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 AC243654.2-201ENST00000612843 443 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 MIR4278-201ENST00000636094 69 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 DCAF13P1-201ENST00000495256 1330 ntBASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRTM1Q9HBL6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRTM1Q9HBL6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRTM1Q9HBL6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LRTM1Q9HBL6 AC138915.3-201ENST00000562908 1389 ntBASIC3.15□□□□□ -1.9
LRTM1Q9HBL6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
LRTM1Q9HBL6 AL592494.2-201ENST00000425455 1548 ntBASIC3.15□□□□□ -1.9
LRTM1Q9HBL6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 HMGB1P13-201ENST00000406019 642 ntBASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 AC245052.5-201ENST00000416320 649 ntBASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 RPL31P45-201ENST00000419532 356 ntBASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 AL049610.1-201ENST00000423374 372 ntBASIC3.15□□□□□ -1.91
LRTM1Q9HBL6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms