Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.24□□□□□ -1.73
BRF2Q9HAW0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
BRF2Q9HAW0 MTCO1P23-201ENST00000415223 1526 ntBASIC4.24□□□□□ -1.73
BRF2Q9HAW0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRF2Q9HAW0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BRF2Q9HAW0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.24□□□□□ -1.73
BRF2Q9HAW0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
BRF2Q9HAW0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC067945.1-201ENST00000342609 618 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 RNU1-15P-201ENST00000353977 144 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 RPL31P1-201ENST00000398116 372 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 TPT1P2-201ENST00000413105 503 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AL049610.1-201ENST00000423374 372 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 RPL7P34-201ENST00000433316 712 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AL132765.1-201ENST00000434165 553 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC006466.1-201ENST00000438721 289 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AL109741.2-201ENST00000455561 343 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MTCYBP17-201ENST00000503579 789 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 PHBP17-201ENST00000528576 541 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MRPS36P5-201ENST00000551909 298 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC107954.1-201ENST00000565906 727 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MTND6P33-201ENST00000571794 183 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 MIR5186-201ENST00000577504 120 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 ELOCP28-201ENST00000590044 317 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC103881.1-201ENST00000603476 538 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC079587.1-201ENST00000603846 277 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC020634.1-201ENST00000608701 549 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AP005019.3-201ENST00000620418 560 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC231657.1-201ENST00000624313 397 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 U6.101-201ENST00000637707 76 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 NUP58P1-201ENST00000502546 1738 ntBASIC4.23□□□□□ -1.73
BRF2Q9HAW0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRF2Q9HAW0 OR56B2P-202ENST00000641377 2453 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RNU6-761P-201ENST00000384148 107 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RNU6-878P-201ENST00000384578 110 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RNY3P9-201ENST00000384727 106 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC016769.3-201ENST00000396562 315 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 MTND4LP20-201ENST00000402379 270 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AL121834.1-202ENST00000404494 277 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 USP9YP33-201ENST00000412220 421 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RPS20P14-201ENST00000412545 360 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RAP1BP1-201ENST00000412709 553 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 EIF4EP1-201ENST00000422311 642 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 USP9YP35-201ENST00000435696 412 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC133473.1-201ENST00000455173 299 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RN7SL610P-201ENST00000463845 291 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 RPL7P22-201ENST00000466005 733 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC087312.1-201ENST00000471411 480 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC108078.3-201ENST00000502633 489 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC108941.1-201ENST00000502853 530 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 MTCO3P44-201ENST00000510977 541 ntBASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.22□□□□□ -1.73
BRF2Q9HAW0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms