Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AC126773.4-201ENST00000612545 3043 ntBASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 LPP-208ENST00000448637 5835 ntTSL 5 BASIC1.71□□□□□ -2.14
KRTAP4-4Q9BYR3 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 POU3F4-201ENST00000373200 3878 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC126323.6-202ENST00000568092 3511 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AC009108.3-201ENST00000602739 3515 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZC4H2-201ENST00000337990 2363 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 BLACAT1-201ENST00000626538 2994 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 AL136087.1-201ENST00000305491 426 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-984P-201ENST00000363236 109 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORD115-30-201ENST00000364117 82 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 SNORA71C-201ENST00000364642 134 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 U8.10-201ENST00000384260 133 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-452P-201ENST00000384406 107 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RNU6-520P-201ENST00000384717 104 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR636-201ENST00000384825 99 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR640-201ENST00000385086 96 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 U3.30-201ENST00000391308 210 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 PTMAP8-201ENST00000397729 342 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 KRTAP9-1-201ENST00000398470 753 ntBASIC1.7□□□□□ -2.14
KRTAP4-4Q9BYR3 MIR885-201ENST00000401316 74 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms