Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC023813.4-201ENST00000607580 580 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AL391813.2-201ENST00000609113 322 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 OR4F13P-202ENST00000560066 2054 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RNA5SP319-201ENST00000362768 119 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RNU1-146P-201ENST00000364015 165 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RNU6-169P-201ENST00000365336 107 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 OR3A2-201ENST00000408891 1076 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RPL35AP24-201ENST00000413846 330 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AL354751.2-201ENST00000415471 210 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 Z93019.1-201ENST00000416450 973 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AL354868.1-201ENST00000417077 482 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RPL36AP36-201ENST00000418616 301 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RN7SL51P-201ENST00000468230 285 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC093267.1-201ENST00000489176 961 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RN7SL284P-201ENST00000498823 275 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 TXNP6-201ENST00000510190 310 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC022616.3-201ENST00000523940 148 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 HPRT1P3-201ENST00000539521 576 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 PDCD5P1-201ENST00000543528 309 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AL356432.3-201ENST00000568952 465 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 RN7SL753P-201ENST00000581238 290 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC012616.1-201ENST00000600294 197 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC025857.2-201ENST00000602711 238 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 PSMA6P4-201ENST00000603247 718 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC115621.1-201ENST00000604653 858 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 Z84480.1-201ENST00000605131 311 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 MIR6768-201ENST00000610734 72 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC100810.6-201ENST00000638068 285 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC079776.5-201ENST00000641920 211 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC009313.2-201ENST00000417893 1941 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 AC092079.1-201ENST00000558620 1985 ntBASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD1Q96NR3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCHD1Q96NR3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.21□□□□□ -1.57
PTCHD1Q96NR3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCHD1Q96NR3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PTCHD1Q96NR3 GVINP1-202ENST00000531871 7271 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 FRG1CP-201ENST00000358464 769 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 RNU6-28P-201ENST00000362378 107 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 RNU6-223P-201ENST00000362830 107 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.162-201ENST00000363683 102 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 RNY1P12-201ENST00000364251 105 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 RNU6-108P-201ENST00000365558 107 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 RNU6-332P-201ENST00000391193 108 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 U3.25-201ENST00000391209 220 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 AL356421.1-201ENST00000403255 413 ntBASIC5.21□□□□□ -1.58
PTCHD1Q96NR3 AL024474.1-201ENST00000404655 591 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms