Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 MIR335-201ENST00000362173 94 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 Y_RNA.83-201ENST00000363005 113 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 Y_RNA.352-201ENST00000365439 102 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 SNORD50.2-201ENST00000365465 70 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 Y_RNA.526-201ENST00000384572 110 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 RNU6-121P-201ENST00000410525 99 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 CYP4F32P-201ENST00000426492 504 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 RN7SL193P-201ENST00000491708 276 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 SNORA14.1-201ENST00000516113 141 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC073046.2-201ENST00000604756 527 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 MIR6820-201ENST00000611508 62 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC064801.1-201ENST00000612025 407 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 CASC19-204ENST00000641001 2055 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LRCH3Q96II8 BDP1P-201ENST00000582658 1990 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 AL359893.1-201ENST00000447628 1580 ntBASIC6.95□□□□□ -1.3
LRCH3Q96II8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.95□□□□□ -1.3
LRCH3Q96II8 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 Y_RNA.84-201ENST00000363011 104 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 RNU6-97P-201ENST00000363387 104 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 Y_RNA.234-201ENST00000364409 97 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 SNORA23-201ENST00000365128 182 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL133384.1-201ENST00000412744 351 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 RPLP0P7-201ENST00000416050 667 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC097713.2-201ENST00000430199 356 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 RPL12P3-201ENST00000440080 396 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 OR2AQ1P-201ENST00000451972 200 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL133351.3-201ENST00000454998 193 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 RPL21P8-201ENST00000465083 535 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 RN7SL727P-201ENST00000482164 296 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC008953.1-201ENST00000497334 318 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 RN7SL466P-201ENST00000497546 295 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC007991.1-201ENST00000522680 631 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AP006587.4-201ENST00000526053 529 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AP002392.1-201ENST00000537692 208 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AP001485.1-201ENST00000604799 199 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC093799.2-201ENST00000610062 578 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 U2.17-201ENST00000611454 95 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LRCH3Q96II8 PRNCR1-201ENST00000635449 12727 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.94□□□□□ -1.3
LRCH3Q96II8 OR13C1P-202ENST00000641378 2919 ntBASIC6.94□□□□□ -1.3
LRCH3Q96II8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 RBPJP2-201ENST00000618187 1444 ntBASIC6.93□□□□□ -1.3
LRCH3Q96II8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LRCH3Q96II8 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LRCH3Q96II8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms