Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RN7SL738P-201ENST00000470264 297 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 SETP11-201ENST00000473027 690 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.06□□□□□ -1.6
HPS3Q969F9 OR2A20P-203ENST00000498397 1268 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 RNF138P1-201ENST00000502765 546 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 ARL4AP1-201ENST00000503220 705 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 SNORD116-26-201ENST00000516006 96 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 RNA5SP464-201ENST00000516251 108 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 NDUFA5P2-201ENST00000519723 344 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC022882.1-201ENST00000532142 501 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 GSTP1P1-201ENST00000548078 319 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 DYNLL1P4-201ENST00000549314 266 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC023161.2-201ENST00000551218 780 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.06□□□□□ -1.6
HPS3Q969F9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AP005119.2-201ENST00000579735 1105 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.06□□□□□ -1.6
HPS3Q969F9 AC090181.2-201ENST00000602975 672 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC087283.1-201ENST00000604029 1074 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC018816.2-201ENST00000621460 353 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 BMS1P21-201ENST00000634565 365 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 AC006927.3-201ENST00000638789 384 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 FAM157B-203ENST00000639350 358 ntBASIC5.06□□□□□ -1.6
HPS3Q969F9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HPS3Q969F9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.06□□□□□ -1.6
HPS3Q969F9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HPS3Q969F9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 OR14L1P-202ENST00000641545 3009 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 SNORA26.8-201ENST00000391306 124 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 CYB5AP4-201ENST00000396692 399 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 RPL7P8-201ENST00000411964 730 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 NPM1P11-201ENST00000417106 855 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 RPS15AP40-201ENST00000419621 391 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.05□□□□□ -1.6
HPS3Q969F9 NPM1P34-201ENST00000428821 893 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 RPL21P91-201ENST00000429231 479 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 ZYG11AP1-201ENST00000430329 837 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.05□□□□□ -1.6
HPS3Q969F9 RPL23AP93-201ENST00000440847 484 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 RPL21P133-201ENST00000443666 476 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 RPL36AP33-201ENST00000450395 310 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC009220.1-201ENST00000451614 275 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 RPS15AP17-201ENST00000470598 390 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 HMGB1P21-201ENST00000502313 581 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC006499.2-201ENST00000513470 337 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 HIGD1AP10-201ENST00000527837 282 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC092851.1-201ENST00000535964 478 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC137768.1-201ENST00000549998 553 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.05□□□□□ -1.6
HPS3Q969F9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 HSPE1P3-201ENST00000559254 309 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC011260.1-201ENST00000578420 472 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 KPNA2P3-201ENST00000584190 848 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC233280.2-201ENST00000603917 1070 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC106028.5-201ENST00000610332 395 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AL158063.1-201ENST00000615349 536 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.05□□□□□ -1.6
HPS3Q969F9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.05□□□□□ -1.6
HPS3Q969F9 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.05□□□□□ -1.6
HPS3Q969F9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.05□□□□□ -1.6
HPS3Q969F9 AC018529.3-201ENST00000624212 2254 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 AC026951.1-201ENST00000559530 2459 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HPS3Q969F9 OR4G11P-202ENST00000642116 1414 ntBASIC5.05□□□□□ -1.6
HPS3Q969F9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HPS3Q969F9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 LINC01355-201ENST00000566551 5444 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 AC108467.2-201ENST00000617640 1597 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HPS3Q969F9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.04□□□□□ -1.6
HPS3Q969F9 ZNF137P-201ENST00000456718 1920 ntBASIC5.04□□□□□ -1.6
HPS3Q969F9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms