Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.99□□□□□ -1.77
TM9SF4Q92544 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
TM9SF4Q92544 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.99□□□□□ -1.77
TM9SF4Q92544 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TM9SF4Q92544 IQCB2P-201ENST00000401788 1633 ntBASIC3.99□□□□□ -1.77
TM9SF4Q92544 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TM9SF4Q92544 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 RNU6-1279P-201ENST00000383917 103 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 MIR554-201ENST00000384874 96 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 RNU2-6P-201ENST00000411404 190 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC048351.1-201ENST00000420064 602 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 RPL7P53-201ENST00000421245 739 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 BMS1P19-201ENST00000433925 393 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 ELOCP18-201ENST00000434209 337 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 UBE2D3P1-201ENST00000436669 444 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 COX6CP18-201ENST00000448769 222 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC104978.1-201ENST00000449387 391 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 BX248409.1-201ENST00000455497 255 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 GAPDHP39-201ENST00000481866 979 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC082651.2-201ENST00000496833 166 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC021146.8-201ENST00000507455 733 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 RNA5SP49-201ENST00000516450 115 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 DEFB109D-201ENST00000529497 240 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC010198.2-201ENST00000550612 259 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 MIR3912-201ENST00000577566 105 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 BNIP3P22-201ENST00000593399 556 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AL451064.1-201ENST00000607718 471 ntBASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.98□□□□□ -1.77
TM9SF4Q92544 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TM9SF4Q92544 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TM9SF4Q92544 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 RNU1-14P-201ENST00000362759 152 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TM9SF4Q92544 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AL359837.1-201ENST00000381357 287 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 RNU6-157P-201ENST00000383957 107 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 Y_RNA.465-201ENST00000384293 102 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 MIR134-201ENST00000385258 73 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AL161909.1-201ENST00000397390 712 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AL603766.1-201ENST00000407763 664 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 RN7SKP202-201ENST00000410439 330 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 RPL36AP36-201ENST00000418616 301 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 COX6B1P7-201ENST00000430845 235 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 MTND4P32-201ENST00000437189 1237 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 CBX1P4-201ENST00000439415 457 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 UBE2V1P5-201ENST00000440070 405 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC092809.1-201ENST00000441469 474 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 Z95327.1-201ENST00000446082 482 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 HMGB1P16-201ENST00000447155 540 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC139783.2-201ENST00000504847 1145 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC093755.1-201ENST00000512950 1023 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 MTCO3P28-201ENST00000513351 515 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC010306.1-201ENST00000523223 1117 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 MTCO1P49-201ENST00000523429 802 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 OR5M7P-201ENST00000526140 972 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 OR5BC1P-201ENST00000529327 739 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC105233.3-201ENST00000531125 744 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 TRAV8-5-201ENST00000537369 341 ntBASIC3.97□□□□□ -1.77
TM9SF4Q92544 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.97□□□□□ -1.77
TM9SF4Q92544 NBEAP1-201ENST00000554452 979 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms