Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A1Q8WWI5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC44A1Q8WWI5 AC022893.2-201ENST00000564832 3296 ntBASIC4.15□□□□□ -1.75
SLC44A1Q8WWI5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 BDP1P-201ENST00000582658 1990 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RNU6-582P-201ENST00000362989 107 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 SUGT1P1-201ENST00000379514 476 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RNY3P9-201ENST00000384727 106 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 PRRC2CP1-201ENST00000404428 159 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 COX6CP17-201ENST00000421389 185 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL031736.2-201ENST00000426573 787 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RPL37P1-201ENST00000432310 284 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL008629.1-201ENST00000438615 184 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC093155.1-201ENST00000440164 826 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 Z99714.1-201ENST00000450463 807 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RPL21P134-201ENST00000453468 483 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 NECAP1P2-201ENST00000455668 727 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC069499.1-201ENST00000489433 509 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC109471.1-201ENST00000511631 612 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RNU6-488P-201ENST00000515918 99 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RNU6-1225P-201ENST00000516336 65 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RNA5SP49-201ENST00000516450 115 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 RNU7-143P-201ENST00000516781 65 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 PDCL2P2-201ENST00000533651 189 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AP000619.3-201ENST00000535634 1127 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC005832.3-201ENST00000537929 631 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC007424.1-203ENST00000554613 687 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 SERPINE4P-201ENST00000554978 281 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 MIR4277-201ENST00000578298 84 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC011477.5-201ENST00000586571 259 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC008687.2-201ENST00000597865 520 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 HMGB1P50-201ENST00000605814 607 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC080013.3-201ENST00000606839 578 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC090948.1-201ENST00000607464 549 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC017037.3-201ENST00000625016 472 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 MIR4278-201ENST00000636094 69 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL592437.2-201ENST00000421655 2434 ntBASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SLC44A1Q8WWI5 AL158163.1-201ENST00000603915 1649 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AC025031.4-201ENST00000621248 3271 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 RPL32P3-201ENST00000359025 275 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 RNA5SP447-201ENST00000363749 119 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 RNU6-1300P-201ENST00000391046 108 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 ZNF603P-201ENST00000405613 487 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 RNA5SP80-201ENST00000410475 111 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 RAB28P1-201ENST00000411517 641 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 MTND4P22-201ENST00000413116 1169 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AC233981.1-201ENST00000423224 461 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 RPL18P10-201ENST00000425606 538 ntBASIC4.13□□□□□ -1.75
SLC44A1Q8WWI5 AC234779.1-201ENST00000425910 285 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms