Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 RPL23AP72-201ENST00000492447 435 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC126177.5-201ENST00000549599 178 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 ACTR3BP2-202ENST00000623630 1338 ntBASIC9.53□□□□□ -0.88
TRIM41Q8WV44 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM41Q8WV44 AC090017.1-201ENST00000548612 1779 ntBASIC9.52□□□□□ -0.88
TRIM41Q8WV44 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
TRIM41Q8WV44 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 RNU5E-1-201ENST00000362477 120 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 Y_RNA.31-201ENST00000362574 102 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 RNA5SP387-201ENST00000364226 106 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AL034374.1-201ENST00000406329 351 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 RNU2-28P-201ENST00000410457 189 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AC019097.1-201ENST00000424783 735 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AC092651.1-201ENST00000426110 312 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 CBX3P6-201ENST00000430257 527 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 H3F3BP1-201ENST00000440551 403 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 RNU7-63P-201ENST00000459054 62 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 RNU6-1208P-201ENST00000459588 107 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 RPL7P15-201ENST00000461190 712 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AC090142.1-201ENST00000465776 462 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AC023424.1-201ENST00000496058 459 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 NUP58P1-201ENST00000502546 1738 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 MIR5186-201ENST00000577504 120 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 MIR3160-1-201ENST00000577972 85 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 AL162431.4-201ENST00000604674 411 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 CYP4F35P-202ENST00000636121 390 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 MR1-209ENST00000617803 7584 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 ARHGAP42P1-201ENST00000507474 1976 ntBASIC9.52□□□□□ -0.89
TRIM41Q8WV44 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
TRIM41Q8WV44 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 ANKRD26P2-201ENST00000445530 1710 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SNX18P3-202ENST00000565670 1750 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 IGKV7-3-201ENST00000357453 298 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SNORA20.2-201ENST00000383922 131 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SNORD116-29-201ENST00000384516 83 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SNORA57.1-201ENST00000391227 145 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SUMO1P2-201ENST00000452524 304 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AC021646.1-201ENST00000605469 484 ntBASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
TRIM41Q8WV44 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 OR52B5P-204ENST00000641744 3467 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
TRIM41Q8WV44 AC011493.1-201ENST00000596753 1632 ntBASIC9.5□□□□□ -0.89
TRIM41Q8WV44 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms