Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RN7SKP209-201ENST00000516888 304 ntBASIC2.54□□□□□ -2
CCDC168Q8NDH2 SNORA31.21-201ENST00000517180 77 ntBASIC2.54□□□□□ -2
CCDC168Q8NDH2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.54□□□□□ -2
CCDC168Q8NDH2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC168Q8NDH2 AC241585.2-209ENST00000638217 143 ntBASIC2.54□□□□□ -2
CCDC168Q8NDH2 OR51C1P-202ENST00000641159 1444 ntBASIC2.54□□□□□ -2
CCDC168Q8NDH2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC168Q8NDH2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.54□□□□□ -2
CCDC168Q8NDH2 SNORA71.1-201ENST00000364523 117 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 RN7SKP199-201ENST00000410325 305 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 CBX1P4-201ENST00000439415 457 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC168Q8NDH2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC168Q8NDH2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 RNU6-859P-201ENST00000362728 107 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 RNA5SP68-201ENST00000363885 119 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 MIR764-201ENST00000390811 85 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 GSTM3P2-201ENST00000412746 530 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 OR51A3P-201ENST00000413596 924 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 RPL23AP36-201ENST00000413895 458 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 KLHL2P1-201ENST00000508691 521 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 AC018797.3-201ENST00000513388 1241 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 AC109329.2-201ENST00000519658 482 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 AC107016.2-201ENST00000547968 190 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 AP005262.1-201ENST00000582646 997 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 RPP40P2-201ENST00000603596 712 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 LSM1P2-201ENST00000604911 322 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 AC022149.2-201ENST00000621061 203 ntBASIC2.53□□□□□ -2
CCDC168Q8NDH2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC168Q8NDH2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CCDC168Q8NDH2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC168Q8NDH2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC168Q8NDH2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 FTH1P6-201ENST00000430768 320 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 RPL21P6-201ENST00000479171 504 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC005798.1-201ENST00000513715 387 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC044913.1-201ENST00000557200 430 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 NOL8P1-201ENST00000508336 3529 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC008638.3-201ENST00000603341 463 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AL353600.1-201ENST00000608148 251 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AP004607.9-201ENST00000618202 316 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AL669942.2-201ENST00000620352 697 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 AC092184.1-201ENST00000625042 715 ntBASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC168Q8NDH2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 Y_RNA.122-201ENST00000363331 96 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 MIR34A-201ENST00000385130 110 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AL136116.1-201ENST00000403591 381 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC021205.1-201ENST00000468797 348 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 HMGB3P14-201ENST00000494195 599 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC108729.3-201ENST00000513484 108 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 MIR4648-201ENST00000580107 72 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC006840.1-201ENST00000623069 542 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AC026634.1-201ENST00000634369 198 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 AL356274.2-201ENST00000624379 3752 ntBASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC168Q8NDH2 MIR518E-201ENST00000385252 88 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms