Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RPL21P41-201ENST00000459863 264 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 FTH1P9-201ENST00000513251 355 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 BMS1P7-201ENST00000602440 1052 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 IGHV3-29-201ENST00000604817 344 ntBASIC4.5□□□□□ -1.69
VPS8Q8N3P4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS8Q8N3P4 AC007336.1-201ENST00000576365 3828 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 CDC27P2-201ENST00000425026 1922 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AL592148.1-201ENST00000413568 445 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 RPS24P13-201ENST00000442520 397 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AC003982.1-202ENST00000469928 248 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 HMGB1P3-201ENST00000502802 616 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 RNA5SP356-201ENST00000515972 94 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AL137072.1-201ENST00000603444 466 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AC007390.2-201ENST00000606229 3803 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AP001005.3-201ENST00000622049 129 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 SCARNA15.3-201ENST00000626315 122 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 SCARNA4.1-201ENST00000628597 123 ntBASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS8Q8N3P4 AC062016.1-201ENST00000355719 319 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 COTL1P1-201ENST00000422309 375 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AC126121.1-201ENST00000482313 553 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 KCTD9P5-201ENST00000504141 1170 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 RPL23AP94-201ENST00000512518 302 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AL590240.3-201ENST00000621416 943 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AL137790.1-201ENST00000634283 177 ntBASIC4.48□□□□□ -1.69
VPS8Q8N3P4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS8Q8N3P4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 RPS29P6-201ENST00000438196 145 ntBASIC4.47□□□□□ -1.69
VPS8Q8N3P4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 MTND6P32-201ENST00000457611 483 ntBASIC4.47□□□□□ -1.69
VPS8Q8N3P4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 RNU6-84P-201ENST00000607737 102 ntBASIC4.47□□□□□ -1.69
VPS8Q8N3P4 MIR7106-201ENST00000612419 65 ntBASIC4.47□□□□□ -1.69
VPS8Q8N3P4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 THAP12P8-201ENST00000447914 2115 ntBASIC4.47□□□□□ -1.69
VPS8Q8N3P4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS8Q8N3P4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS8Q8N3P4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AL513175.1-201ENST00000431492 780 ntBASIC4.46□□□□□ -1.69
VPS8Q8N3P4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AP004217.1-201ENST00000480579 346 ntBASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AC021146.5-201ENST00000503544 545 ntBASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.46□□□□□ -1.69
VPS8Q8N3P4 GTF3AP2-201ENST00000557014 266 ntBASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.46□□□□□ -1.69
VPS8Q8N3P4 AL355493.4-201ENST00000618530 292 ntBASIC4.46□□□□□ -1.69
VPS8Q8N3P4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC026523.2-201ENST00000625039 7739 ntBASIC4.46□□□□□ -1.7
VPS8Q8N3P4 OR5J1P-201ENST00000313544 939 ntBASIC4.46□□□□□ -1.7
VPS8Q8N3P4 TXNP1-201ENST00000441872 371 ntBASIC4.46□□□□□ -1.7
VPS8Q8N3P4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC010338.1-201ENST00000621823 717 ntBASIC4.46□□□□□ -1.7
VPS8Q8N3P4 AC119674.1-212ENST00000641155 993 ntBASIC4.46□□□□□ -1.7
VPS8Q8N3P4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS8Q8N3P4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS8Q8N3P4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS8Q8N3P4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
VPS8Q8N3P4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
VPS8Q8N3P4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS8Q8N3P4 RNU1-35P-201ENST00000362782 153 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms