Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 GAPDHP53-201ENST00000458397 924 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC131935.1-201ENST00000524621 333 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC023442.1-201ENST00000531247 422 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 CHEK2P2-201ENST00000554701 672 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC008521.1-201ENST00000587471 187 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC104687.2-201ENST00000604442 342 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC010378.1-201ENST00000619270 362 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 CYP4F35P-202ENST00000636121 390 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AL359893.1-201ENST00000447628 1580 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC087516.1-201ENST00000561236 2428 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 MTND4P1-201ENST00000457501 1466 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC092692.1-201ENST00000623625 2595 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 SNORD3E-201ENST00000362899 217 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RN7SKP189-201ENST00000365042 330 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 SNORA70.3-201ENST00000365075 132 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RNU1-55P-201ENST00000365510 158 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 MIR568-201ENST00000385036 95 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 MIR450B-201ENST00000401182 78 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RPL21P24-201ENST00000413752 448 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 MTCYBP10-201ENST00000424905 650 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AL354714.5-201ENST00000450131 590 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 GOT2P2-201ENST00000450663 1251 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC087385.1-201ENST00000475062 312 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 SNRPCP11-201ENST00000492453 205 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC010350.1-201ENST00000504908 231 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 CARSP2-201ENST00000520688 277 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC090115.3-201ENST00000553218 849 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AC011921.2-201ENST00000589465 152 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 MIR6780B-201ENST00000610307 79 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AL021918.2-201ENST00000613415 194 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 U1.41-201ENST00000617626 165 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 MRPL57P3-201ENST00000619218 176 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 AL669831.3-213ENST00000636676 183 ntBASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DEPDC4Q8N2C3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MTCO1P24-201ENST00000515438 1558 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AC079753.1-201ENST00000623243 3868 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 AL049641.1-201ENST00000441055 1948 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-128P-201ENST00000383976 107 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MIR621-201ENST00000384919 96 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 MT-TG-201ENST00000387429 68 ntBASIC6.06□□□□□ -1.44
DEPDC4Q8N2C3 RNA5SP219-201ENST00000390940 113 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms