Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 OR5AP1P-201ENST00000529730 940 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 OR4A45P-201ENST00000529954 901 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AK6P1-201ENST00000540219 478 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC123904.3-201ENST00000547218 814 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC087477.6-201ENST00000559595 843 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 HMGB1P33-201ENST00000563485 527 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC233702.9-201ENST00000581528 203 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC022726.1-201ENST00000587475 207 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 RNU6-88P-201ENST00000606801 100 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 RNU6-84P-201ENST00000607737 102 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AP004247.3-201ENST00000608682 624 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AL020991.1-201ENST00000612314 373 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC108479.2-201ENST00000617314 601 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 CR381572.2-201ENST00000624852 397 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
VRK3Q8IV63 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 AC107982.1-201ENST00000507171 1300 ntBASIC4.72□□□□□ -1.65
VRK3Q8IV63 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VRK3Q8IV63 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VRK3Q8IV63 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.71□□□□□ -1.65
VRK3Q8IV63 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.71□□□□□ -1.65
VRK3Q8IV63 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VRK3Q8IV63 SMG1P6-201ENST00000532337 2930 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 LINC00561-201ENST00000565815 2738 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VRK3Q8IV63 CDR1-202ENST00000625883 1485 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL031985.3-201ENST00000565390 2449 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 SMG1P4-204ENST00000523028 4131 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VRK3Q8IV63 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VRK3Q8IV63 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 RNU6-666P-201ENST00000363499 107 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 RNU6-1066P-201ENST00000363573 105 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 RNU6-723P-201ENST00000383973 107 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 GSTA9P-201ENST00000406231 611 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 Y_RNA.598-201ENST00000410480 95 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 RNA5SP498-201ENST00000411342 120 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 CTSL3P-202ENST00000412179 788 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 RPS20P15-201ENST00000412792 311 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 EEF1A1P40-201ENST00000412883 573 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 E2F6P2-201ENST00000420708 748 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 RPS27AP14-201ENST00000422868 454 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL034379.1-201ENST00000423216 253 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL356583.2-201ENST00000426536 280 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 BRWD1P3-201ENST00000428816 390 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC104850.1-201ENST00000435940 476 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 PGBD4P3-201ENST00000440731 581 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL831737.1-201ENST00000441288 271 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC012512.1-201ENST00000446594 718 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 CENPUP1-201ENST00000526649 1202 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL157687.1-201ENST00000554853 619 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 TRAV15-201ENST00000556680 249 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL391840.1-201ENST00000571144 367 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 RN7SL802P-201ENST00000577858 299 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 MIR5699-201ENST00000578903 90 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.71□□□□□ -1.66
VRK3Q8IV63 BNIP3P8-201ENST00000597863 560 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC024940.4-201ENST00000605507 246 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL590282.1-201ENST00000610379 1136 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AL359535.1-201ENST00000612100 1087 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AP001506.1-201ENST00000615444 211 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC009233.1-201ENST00000616477 371 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC234782.5-201ENST00000617723 324 ntBASIC4.71□□□□□ -1.66
VRK3Q8IV63 AC009033.1-201ENST00000624279 431 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 379.5 ms