Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 AC008837.1-201ENST00000511513 412 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 GMCL1P2-201ENST00000605230 823 ntBASIC2.07□□□□□ -2.08
CSMD3Q7Z407 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CSMD3Q7Z407 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 RNU6-283P-201ENST00000364788 107 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 MIR1287-201ENST00000408492 90 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 UBE2V2P4-201ENST00000447495 259 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC009097.3-201ENST00000563557 1018 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 BNIP3P38-201ENST00000601117 544 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC026790.2-201ENST00000606282 430 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC015813.4-201ENST00000610469 179 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 HSPE1P8-201ENST00000406997 288 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 U3.42-201ENST00000408746 214 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 RAP1BP1-201ENST00000412709 553 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 HMGN2P3-201ENST00000433603 273 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 ELOCP18-201ENST00000434209 337 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AL590103.1-201ENST00000434488 307 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 HMGN2P5-201ENST00000436882 273 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC074276.2-201ENST00000619891 348 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AL356321.1-201ENST00000621360 228 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC104297.1-201ENST00000393779 870 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC063976.3-201ENST00000426849 329 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 SERPINE4P-201ENST00000554978 281 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AL583832.1-201ENST00000603227 784 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CSMD3Q7Z407 NSRP1P1-201ENST00000444067 1693 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 AC017071.1-201ENST00000564407 2204 ntBASIC2.06□□□□□ -2.08
CSMD3Q7Z407 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 RNA5SP289-201ENST00000362332 137 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 RPL7L1P1-201ENST00000448259 785 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC006840.1-201ENST00000623069 542 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 TTC39DP-201ENST00000416781 1688 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 OR5BR1P-201ENST00000524992 1330 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC018555.1-201ENST00000567548 1980 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 SMC4P1-201ENST00000414479 527 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC233309.1-201ENST00000619522 751 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AL669942.2-201ENST00000620352 697 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 ZNF658B-202ENST00000615961 3375 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 HSPA8P4-201ENST00000511877 1920 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 RNA5SP21-201ENST00000410917 96 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 RANP4-201ENST00000413361 655 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 UQCRHP3-201ENST00000451503 251 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC008280.2-201ENST00000455473 307 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC008565.1-201ENST00000509046 885 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 OR5AP1P-201ENST00000529730 940 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AL158062.1-201ENST00000619632 745 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC073476.4-201ENST00000628409 72 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 AC116096.1-201ENST00000566804 2314 ntBASIC2.05□□□□□ -2.08
CSMD3Q7Z407 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CSMD3Q7Z407 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CSMD3Q7Z407 FAM35BP-202ENST00000497389 3337 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 USP12PY-201ENST00000427677 1064 ntBASIC2.04□□□□□ -2.08
CSMD3Q7Z407 RPL23AP71-201ENST00000470966 469 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms