Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SCXQ7RTU7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCXQ7RTU7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCXQ7RTU7 AP004289.2-201ENST00000444413 1457 ntBASIC2.51□□□□□ -2.01
SCXQ7RTU7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.51□□□□□ -2.01
SCXQ7RTU7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.51□□□□□ -2.01
SCXQ7RTU7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC016716.1-201ENST00000265882 708 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 SNORA71.3-201ENST00000362582 128 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 RNA5SP399-201ENST00000364003 117 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 RNU6-883P-201ENST00000384597 107 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 MIR449B-201ENST00000384995 97 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AL353692.2-201ENST00000407054 335 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 MIR1251-201ENST00000408552 70 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 RNU2-71P-201ENST00000411395 189 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC006946.1-201ENST00000429106 328 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 MRPL35P4-201ENST00000453682 566 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 MTCO3P16-201ENST00000454456 754 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 RN7SL93P-201ENST00000463035 293 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC010307.1-201ENST00000467206 836 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 HMGB1P22-201ENST00000505315 124 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC026726.1-201ENST00000512859 601 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 RNU6-352P-201ENST00000516908 107 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 PAICSP4-201ENST00000517543 1253 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AP001207.1-201ENST00000524051 481 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 C1DP5-201ENST00000525775 383 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AL442163.2-201ENST00000553912 710 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC087499.8-201ENST00000578406 226 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 KATNBL1P1-201ENST00000605192 748 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC099778.2-201ENST00000610904 211 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AC008121.2-201ENST00000614647 523 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 AL139089.1-201ENST00000620372 975 ntBASIC2.5□□□□□ -2.01
SCXQ7RTU7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.5□□□□□ -2.01
SCXQ7RTU7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCXQ7RTU7 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 LINC00561-201ENST00000565815 2738 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AL359893.1-201ENST00000447628 1580 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 RNU6-543P-201ENST00000362576 108 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 HMGN2P8-201ENST00000391458 268 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPL7AP73-201ENST00000413490 353 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 AIMP1P1-201ENST00000418670 937 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 ARL2BPP3-201ENST00000421226 480 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 YME1L1P1-201ENST00000429435 297 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 UBE2V1P1-201ENST00000430836 445 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 HIGD1AP11-201ENST00000438361 280 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 TXNP1-201ENST00000441872 371 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPL23AP15-201ENST00000450202 459 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPL12P26-201ENST00000452430 487 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPL23AP23-201ENST00000452590 471 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPL21P11-201ENST00000461458 483 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPL21P104-201ENST00000464143 478 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 SYPL1P1-201ENST00000473622 768 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 AC025181.1-201ENST00000477507 416 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 RPS3AP6-201ENST00000484430 795 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCXQ7RTU7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.49□□□□□ -2.01
SCXQ7RTU7 AC093853.1-201ENST00000515689 483 ntBASIC2.49□□□□□ -2.01
SCXQ7RTU7 RN7SKP157-201ENST00000516174 282 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms