Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 VTA1P1-201ENST00000414044 866 ntBASIC2.89□□□□□ -1.95
RIF1Q5UIP0 HMGB3P22-202ENST00000451823 572 ntBASIC2.89□□□□□ -1.95
RIF1Q5UIP0 MTCO3P16-201ENST00000454456 754 ntBASIC2.89□□□□□ -1.95
RIF1Q5UIP0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 AC117522.3-201ENST00000507974 584 ntBASIC2.89□□□□□ -1.95
RIF1Q5UIP0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 SERPINE4P-201ENST00000554978 281 ntBASIC2.89□□□□□ -1.95
RIF1Q5UIP0 AC007496.3-201ENST00000624987 3443 ntBASIC2.89□□□□□ -1.95
RIF1Q5UIP0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RIF1Q5UIP0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 AP000926.3-201ENST00000497201 299 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 AC007938.3-201ENST00000604965 623 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 uc_338.1-201ENST00000612113 180 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 PLCE1P1-201ENST00000622094 305 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 NOL8P1-201ENST00000508336 3529 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 AC015712.3-201ENST00000559380 164 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 OR7A8P-201ENST00000595427 913 ntBASIC2.88□□□□□ -1.95
RIF1Q5UIP0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RIF1Q5UIP0 Y_RNA.164-201ENST00000363709 102 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AL592148.1-201ENST00000413568 445 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AL353705.4-201ENST00000449661 238 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RNA5SP148-201ENST00000516527 94 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC015917.1-201ENST00000579654 510 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC118273.1-201ENST00000525324 3006 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 TCP1P3-201ENST00000414406 1498 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 OR4G2P-202ENST00000641004 1759 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 Y_RNA.269-201ENST00000364685 89 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RPS26P47-201ENST00000427219 348 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 FAM103A2P-201ENST00000444122 354 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC005008.1-201ENST00000456151 612 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC004057.1-201ENST00000485827 348 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RPS26P15-201ENST00000488067 348 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 MIR4472-2-201ENST00000582069 67 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 AP001004.1-201ENST00000582468 324 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 PRELID3BP8-201ENST00000604148 295 ntBASIC2.87□□□□□ -1.95
RIF1Q5UIP0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
RIF1Q5UIP0 RNU6-283P-201ENST00000364788 107 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 HDGFP1-201ENST00000405943 252 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 RNA5SP21-201ENST00000410917 96 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AL158062.1-201ENST00000619632 745 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AC022031.1-201ENST00000585985 2593 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 RNA5SP52-201ENST00000362448 134 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 RNA5SP445-201ENST00000515889 115 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 AC027176.1-201ENST00000560204 514 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 CTSLP2-204ENST00000629029 392 ntBASIC2.86□□□□□ -1.95
RIF1Q5UIP0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RIF1Q5UIP0 OR1S2-201ENST00000302592 978 ntBASIC2.85□□□□□ -1.95
RIF1Q5UIP0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RIF1Q5UIP0 RNU1-108P-201ENST00000362556 161 ntBASIC2.85□□□□□ -1.95
RIF1Q5UIP0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.85□□□□□ -1.95
RIF1Q5UIP0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.85□□□□□ -1.95
RIF1Q5UIP0 AL590103.1-201ENST00000434488 307 ntBASIC2.85□□□□□ -1.95
RIF1Q5UIP0 HMGB3P14-201ENST00000494195 599 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms