Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 OR4R3P-201ENST00000525084 838 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 OR8R1P-201ENST00000543943 764 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 OR6C73P-201ENST00000546432 358 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC055876.1-202ENST00000567053 138 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RN7SL703P-201ENST00000578485 302 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC015917.1-201ENST00000579654 510 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AL592494.3-201ENST00000609485 464 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AL354976.1-201ENST00000613843 387 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC119674.1-207ENST00000641355 633 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 AC026979.1-201ENST00000492525 396 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 AC098799.2-201ENST00000509466 868 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 FCF1P8-201ENST00000510322 597 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 HSPE1P5-201ENST00000561489 272 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC58Q4VC31 AL355816.1-201ENST00000607951 118 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 AL391497.1-201ENST00000608671 547 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 AC099676.1-201ENST00000608886 657 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 uc_338.1-201ENST00000612113 180 ntBASIC2.94□□□□□ -1.94
CCDC58Q4VC31 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AL645937.1-201ENST00000641739 1652 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 MTND4P13-201ENST00000402078 1023 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 SNORA81-201ENST00000408493 178 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 RNA5SP44-201ENST00000410446 133 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC013404.1-201ENST00000413068 249 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 VDAC1P3-201ENST00000434069 851 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 RSL24D1P2-201ENST00000445584 366 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC115115.1-201ENST00000449927 248 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 NF1P3-201ENST00000457709 450 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 OR4A2P-201ENST00000527276 913 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC012119.1-201ENST00000603184 222 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AL451086.1-201ENST00000605596 223 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AL591516.1-201ENST00000611326 274 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AP002907.1-201ENST00000606361 1430 ntBASIC2.93□□□□□ -1.94
CCDC58Q4VC31 AC006042.3-201ENST00000454684 1469 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 U8.11-201ENST00000384699 133 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 U8.12-201ENST00000384701 133 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 RNU2-71P-201ENST00000411395 189 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 RPL19P1-201ENST00000411635 428 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 SAR1AP4-201ENST00000429225 591 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 RPL17P49-201ENST00000443728 411 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC073387.1-201ENST00000453261 709 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 U8.18-201ENST00000459285 133 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 LARP7P4-201ENST00000481075 878 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 RPL30P11-201ENST00000495304 339 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 RN7SKP18-201ENST00000516005 275 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 RN7SKP116-201ENST00000516902 319 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 TRMT10BP1-201ENST00000519377 943 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC025423.2-201ENST00000537570 439 ntBASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.92□□□□□ -1.94
CCDC58Q4VC31 MTCO3P13-201ENST00000577757 781 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms