Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPL29P29-201ENST00000448725 423 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 EPS15P1-201ENST00000448836 336 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC090142.1-201ENST00000465776 462 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AP000797.1-201ENST00000478870 387 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 RPL23AP72-201ENST00000492447 435 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC013828.2-201ENST00000532487 235 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 MIR4697-201ENST00000582977 78 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AL353997.4-201ENST00000586196 166 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC068790.2-201ENST00000602601 557 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 IMMP1LP1-201ENST00000605170 488 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AP001521.2-201ENST00000608772 546 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 MTCO1P24-201ENST00000515438 1558 ntBASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC144BQ3MJ40 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 FGF7P2-201ENST00000332473 296 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 RNA5SP191-201ENST00000362585 102 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 RNA5SP113-201ENST00000410486 84 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 MTCO1P17-201ENST00000411522 491 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 RPS7P13-201ENST00000413955 498 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC119751.6-201ENST00000416712 186 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 UBTFL3-201ENST00000418934 1024 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 CENPIP1-201ENST00000425713 902 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 PSMA6P3-201ENST00000428242 164 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL590233.1-201ENST00000430017 456 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 SDCBPP1-201ENST00000440192 890 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AP000936.2-201ENST00000447151 681 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 TCEA1P1-201ENST00000449716 880 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 DNAJC19P1-201ENST00000455312 319 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 FTH1P2-201ENST00000466086 412 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 UBTFL6-201ENST00000477929 1024 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC004069.2-201ENST00000505438 1114 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 TXNP6-201ENST00000510190 310 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC034159.1-201ENST00000513885 583 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 HIGD1AP3-201ENST00000515857 278 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC025881.1-201ENST00000518851 512 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL139174.1-201ENST00000531489 886 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC006362.1-201ENST00000567392 174 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC012414.6-201ENST00000568241 401 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC012065.4-201ENST00000602445 679 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC010680.4-201ENST00000605334 543 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL391358.1-201ENST00000605342 190 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 COX6CP4-201ENST00000605798 228 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC009704.2-201ENST00000618739 483 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL356121.2-201ENST00000624715 780 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC093591.3-201ENST00000634516 308 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AL359893.1-201ENST00000447628 1580 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC006378.2-201ENST00000623178 2476 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 AC090229.1-201ENST00000590983 1609 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 FAM91A3P-201ENST00000456826 2544 ntBASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC144BQ3MJ40 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 Z73965.1-201ENST00000623412 2297 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 SAMMSON-226ENST00000642089 1582 ntBASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC144BQ3MJ40 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms