Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC96Q2M329 AC008638.3-201ENST00000603341 463 ntBASIC4.73□□□□□ -1.65
CCDC96Q2M329 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC96Q2M329 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC96Q2M329 MIR4278-201ENST00000636094 69 ntBASIC4.73□□□□□ -1.65
CCDC96Q2M329 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC96Q2M329 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC96Q2M329 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC96Q2M329 AC000367.1-201ENST00000452711 1766 ntBASIC4.73□□□□□ -1.65
CCDC96Q2M329 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC96Q2M329 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC96Q2M329 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC073264.1-201ENST00000411508 416 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 HSFY3P-201ENST00000444242 1191 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 HMGN2P21-201ENST00000447764 270 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 GTF2IP12-201ENST00000456547 356 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC078785.3-201ENST00000476607 425 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 RPS27P23-201ENST00000487608 251 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 RNF138P1-201ENST00000502765 546 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC96Q2M329 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 MTND4LP31-201ENST00000514859 294 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 RNU6-202P-201ENST00000515998 96 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 AP001207.2-201ENST00000519490 539 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 RN7SL703P-201ENST00000578485 302 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC109809.1-201ENST00000619665 545 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC006927.4-201ENST00000639187 543 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC96Q2M329 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC96Q2M329 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 PABPC1P7-201ENST00000413177 1513 ntBASIC4.72□□□□□ -1.65
CCDC96Q2M329 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC96Q2M329 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC96Q2M329 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 SNORA31-201ENST00000362607 130 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 RNU6-298P-201ENST00000390888 96 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 ZNF603P-201ENST00000405613 487 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 SNORA11-201ENST00000408789 128 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 RNA5SP39-201ENST00000411245 120 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 RPL31P2-201ENST00000413849 377 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 MTCO1P54-201ENST00000430139 712 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 TBCAP1-201ENST00000436520 327 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 CYCSP43-201ENST00000438233 310 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 RPS11P1-201ENST00000451072 473 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 DUXAP8-207ENST00000456786 622 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 RPS4XP15-201ENST00000489210 795 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 AC078918.1-201ENST00000498515 228 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 SUMO2P5-201ENST00000506790 245 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 TMEM248P1-201ENST00000510579 951 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 HIGD1AP3-201ENST00000515857 278 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 EIF5A2P1-201ENST00000564027 460 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 AC112230.1-201ENST00000604342 547 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 DUXAP10-204ENST00000612052 616 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 AC048347.1-201ENST00000624621 427 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 AP005264.7-201ENST00000625003 745 ntBASIC4.71□□□□□ -1.66
CCDC96Q2M329 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC96Q2M329 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC96Q2M329 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC96Q2M329 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC96Q2M329 AC016588.2-201ENST00000632484 3021 ntBASIC4.7□□□□□ -1.66
CCDC96Q2M329 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC96Q2M329 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC96Q2M329 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC96Q2M329 AF127577.6-201ENST00000623352 2191 ntBASIC4.7□□□□□ -1.66
CCDC96Q2M329 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC96Q2M329 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms