Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 OR5BE1P-202ENST00000641168 1176 ntBASIC4.03□□□□□ -1.76
CDK3Q00526 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDK3Q00526 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK3Q00526 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.77
CDK3Q00526 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK3Q00526 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 OR4A15-201ENST00000314706 1035 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 SNORD35B-201ENST00000363660 87 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.02□□□□□ -1.77
CDK3Q00526 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDK3Q00526 MIR649-201ENST00000384843 97 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.02□□□□□ -1.77
CDK3Q00526 ELOCP9-201ENST00000418624 239 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 KRR1P1-201ENST00000419430 803 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 RPL17P36-201ENST00000420302 549 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 XKRYP1-201ENST00000423438 492 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AL691449.1-201ENST00000426570 421 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 USP9YP31-201ENST00000431405 881 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 XKRYP2-201ENST00000432915 492 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 HMGB3P9-201ENST00000441799 583 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AL591719.1-201ENST00000444669 744 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 BX276092.4-201ENST00000452056 248 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK3Q00526 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK3Q00526 RPL5P24-201ENST00000463742 885 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 RPS26P28-201ENST00000470806 348 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 RPS3AP6-201ENST00000484430 795 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 AC091951.3-201ENST00000504093 246 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 RN7SKP287-201ENST00000516546 266 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.02□□□□□ -1.77
CDK3Q00526 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 AC005832.3-201ENST00000537929 631 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 BNIP3P26-201ENST00000600827 554 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 AC093424.1-201ENST00000604999 338 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 MIR6868-201ENST00000611215 58 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC087683.2-201ENST00000611384 326 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC005332.6-201ENST00000613178 446 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK3Q00526 BMS1P21-201ENST00000634565 365 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 MIR6715B-201ENST00000637172 77 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 MKKS-204ENST00000639674 192 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK3Q00526 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 AC117529.2-201ENST00000512159 2068 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AC011978.2-201ENST00000569835 2054 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK3Q00526 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CDK3Q00526 AC017104.4-201ENST00000636283 1592 ntBASIC4.02□□□□□ -1.77
CDK3Q00526 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK3Q00526 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDK3Q00526 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CDK3Q00526 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDK3Q00526 AL139811.1-201ENST00000424779 2299 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 ZNF876P-202ENST00000398732 1485 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDK3Q00526 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDK3Q00526 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDK3Q00526 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK3Q00526 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK3Q00526 PGBD4P8-201ENST00000412993 562 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 LUZP4P1-201ENST00000415420 344 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK3Q00526 HMGB1P49-201ENST00000418882 569 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 MTND2P16-201ENST00000419987 799 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK3Q00526 OR8F1P-201ENST00000425243 930 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK3Q00526 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK3Q00526 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK3Q00526 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK3Q00526 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK3Q00526 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK3Q00526 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDK3Q00526 GAPDHP36-201ENST00000480688 918 ntBASIC4.01□□□□□ -1.77
CDK3Q00526 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms