Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC098799.1-201ENST00000504752 800 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AC118282.1-201ENST00000506408 765 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.88□□□□□ -1.95
UBA52P62987 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.88□□□□□ -1.95
UBA52P62987 AC119751.1-201ENST00000513357 765 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.88□□□□□ -1.95
UBA52P62987 SNORA70.18-201ENST00000516696 98 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.88□□□□□ -1.95
UBA52P62987 SMARCE1P4-201ENST00000523647 241 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.88□□□□□ -1.95
UBA52P62987 AC055876.1-202ENST00000567053 138 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.88□□□□□ -1.95
UBA52P62987 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.88□□□□□ -1.95
UBA52P62987 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.88□□□□□ -1.95
UBA52P62987 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
UBA52P62987 ZNF833P-201ENST00000424938 1494 ntBASIC2.88□□□□□ -1.95
UBA52P62987 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.88□□□□□ -1.95
UBA52P62987 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.88□□□□□ -1.95
UBA52P62987 AC017071.1-201ENST00000564407 2204 ntBASIC2.88□□□□□ -1.95
UBA52P62987 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
UBA52P62987 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.87□□□□□ -1.95
UBA52P62987 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
UBA52P62987 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
UBA52P62987 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 RNU4-35P-201ENST00000362588 141 ntBASIC2.87□□□□□ -1.95
UBA52P62987 U3.6-201ENST00000363622 211 ntBASIC2.87□□□□□ -1.95
UBA52P62987 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 MIR128-1-201ENST00000384921 82 ntBASIC2.87□□□□□ -1.95
UBA52P62987 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 AL356968.1-201ENST00000416622 474 ntBASIC2.87□□□□□ -1.95
UBA52P62987 RPF2P1-201ENST00000424137 906 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AJ239321.1-201ENST00000424255 564 ntBASIC2.87□□□□□ -1.95
UBA52P62987 OR2AS1P-201ENST00000427827 319 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.87□□□□□ -1.95
UBA52P62987 HMGB3P11-201ENST00000440127 604 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.87□□□□□ -1.95
UBA52P62987 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 RN7SL75P-201ENST00000461926 281 ntBASIC2.87□□□□□ -1.95
UBA52P62987 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.87□□□□□ -1.95
UBA52P62987 RPL21P18-201ENST00000469899 480 ntBASIC2.87□□□□□ -1.95
UBA52P62987 RN7SL594P-201ENST00000470590 287 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AC025518.1-201ENST00000479856 347 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 MTCO1P30-201ENST00000515244 580 ntBASIC2.87□□□□□ -1.95
UBA52P62987 RNU1-143P-201ENST00000516296 146 ntBASIC2.87□□□□□ -1.95
UBA52P62987 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.87□□□□□ -1.95
UBA52P62987 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.87□□□□□ -1.95
UBA52P62987 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.87□□□□□ -1.95
UBA52P62987 AC006270.2-201ENST00000578523 652 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 MAGOH2P-202ENST00000584384 429 ntBASIC2.87□□□□□ -1.95
UBA52P62987 U1.23-201ENST00000610293 146 ntBASIC2.87□□□□□ -1.95
UBA52P62987 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.87□□□□□ -1.95
UBA52P62987 RNU1-68P-201ENST00000615382 146 ntBASIC2.87□□□□□ -1.95
UBA52P62987 AC243756.2-201ENST00000618406 463 ntBASIC2.87□□□□□ -1.95
UBA52P62987 U1.39-201ENST00000621562 146 ntBASIC2.87□□□□□ -1.95
UBA52P62987 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 AC048347.1-201ENST00000624621 427 ntBASIC2.87□□□□□ -1.95
UBA52P62987 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.87□□□□□ -1.95
UBA52P62987 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
UBA52P62987 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 AC093831.2-201ENST00000624393 3427 ntBASIC2.87□□□□□ -1.95
UBA52P62987 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UBA52P62987 AC107081.3-201ENST00000612715 2034 ntBASIC2.86□□□□□ -1.95
UBA52P62987 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UBA52P62987 AC118273.1-201ENST00000525324 3006 ntBASIC2.86□□□□□ -1.95
UBA52P62987 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.86□□□□□ -1.95
UBA52P62987 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UBA52P62987 RNA5SP167-201ENST00000365461 116 ntBASIC2.86□□□□□ -1.95
UBA52P62987 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.86□□□□□ -1.95
UBA52P62987 OR6K3-202ENST00000368146 996 ntBASIC2.86□□□□□ -1.95
UBA52P62987 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
UBA52P62987 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.86□□□□□ -1.95
UBA52P62987 HSFY4P-201ENST00000415994 1181 ntBASIC2.86□□□□□ -1.95
UBA52P62987 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.86□□□□□ -1.95
UBA52P62987 AC073069.1-201ENST00000428657 441 ntBASIC2.86□□□□□ -1.95
UBA52P62987 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.86□□□□□ -1.95
UBA52P62987 MTCO1P52-201ENST00000433928 531 ntBASIC2.86□□□□□ -1.95
UBA52P62987 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.86□□□□□ -1.95
UBA52P62987 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.86□□□□□ -1.95
UBA52P62987 RPL23AP12-201ENST00000467573 473 ntBASIC2.86□□□□□ -1.95
UBA52P62987 AC012170.1-201ENST00000495139 359 ntBASIC2.86□□□□□ -1.95
UBA52P62987 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.86□□□□□ -1.95
UBA52P62987 HMGB1P21-201ENST00000502313 581 ntBASIC2.86□□□□□ -1.95
UBA52P62987 FTH1P24-201ENST00000503502 462 ntBASIC2.86□□□□□ -1.95
UBA52P62987 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.86□□□□□ -1.95
UBA52P62987 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.86□□□□□ -1.95
UBA52P62987 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.86□□□□□ -1.95
UBA52P62987 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.86□□□□□ -1.95
UBA52P62987 MIR8057-201ENST00000620957 69 ntBASIC2.86□□□□□ -1.95
UBA52P62987 SCARNA15.3-201ENST00000626315 122 ntBASIC2.86□□□□□ -1.95
UBA52P62987 SCARNA4.1-201ENST00000628597 123 ntBASIC2.86□□□□□ -1.95
UBA52P62987 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms