Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.98
LSM3P62310 RNU1-35P-201ENST00000362782 153 ntBASIC2.65□□□□□ -1.99
LSM3P62310 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LSM3P62310 AL359837.1-201ENST00000381357 287 ntBASIC2.65□□□□□ -1.99
LSM3P62310 RPL21P17-201ENST00000397467 475 ntBASIC2.65□□□□□ -1.99
LSM3P62310 CCNB2P1-201ENST00000399411 1150 ntBASIC2.65□□□□□ -1.99
LSM3P62310 AL355379.1-201ENST00000405542 640 ntBASIC2.65□□□□□ -1.99
LSM3P62310 U3.42-201ENST00000408746 214 ntBASIC2.65□□□□□ -1.99
LSM3P62310 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.65□□□□□ -1.99
LSM3P62310 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM3P62310 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM3P62310 TRIM60P18-201ENST00000441518 828 ntBASIC2.65□□□□□ -1.99
LSM3P62310 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.65□□□□□ -1.99
LSM3P62310 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.65□□□□□ -1.99
LSM3P62310 MTCYBP21-201ENST00000443300 1113 ntBASIC2.65□□□□□ -1.99
LSM3P62310 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM3P62310 RPL21P10-201ENST00000463521 490 ntBASIC2.65□□□□□ -1.99
LSM3P62310 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
LSM3P62310 RPS29P2-201ENST00000479278 136 ntBASIC2.65□□□□□ -1.99
LSM3P62310 AC103975.1-201ENST00000482506 483 ntBASIC2.65□□□□□ -1.99
LSM3P62310 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.65□□□□□ -1.99
LSM3P62310 AC104986.1-201ENST00000517978 436 ntBASIC2.65□□□□□ -1.99
LSM3P62310 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM3P62310 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.65□□□□□ -1.99
LSM3P62310 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM3P62310 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.65□□□□□ -1.99
LSM3P62310 RPL21P12-201ENST00000559810 515 ntBASIC2.65□□□□□ -1.99
LSM3P62310 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.65□□□□□ -1.99
LSM3P62310 AL031985.2-201ENST00000600955 480 ntBASIC2.65□□□□□ -1.99
LSM3P62310 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.65□□□□□ -1.99
LSM3P62310 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LSM3P62310 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
LSM3P62310 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LSM3P62310 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LSM3P62310 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LSM3P62310 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LSM3P62310 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM3P62310 MTND4P13-201ENST00000402078 1023 ntBASIC2.64□□□□□ -1.99
LSM3P62310 HSFY4P-201ENST00000415994 1181 ntBASIC2.64□□□□□ -1.99
LSM3P62310 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.64□□□□□ -1.99
LSM3P62310 RPL7P2-201ENST00000427639 268 ntBASIC2.64□□□□□ -1.99
LSM3P62310 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 AL590103.1-201ENST00000434488 307 ntBASIC2.64□□□□□ -1.99
LSM3P62310 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 ELOCP23-201ENST00000452014 332 ntBASIC2.64□□□□□ -1.99
LSM3P62310 RBMY2UP-201ENST00000453474 324 ntBASIC2.64□□□□□ -1.99
LSM3P62310 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM3P62310 RPL21P13-201ENST00000488305 481 ntBASIC2.64□□□□□ -1.99
LSM3P62310 RPL5P23-201ENST00000496040 868 ntBASIC2.64□□□□□ -1.99
LSM3P62310 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.64□□□□□ -1.99
LSM3P62310 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM3P62310 MTCO1P35-201ENST00000515270 228 ntBASIC2.64□□□□□ -1.99
LSM3P62310 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
LSM3P62310 AC022790.1-201ENST00000522872 204 ntBASIC2.64□□□□□ -1.99
LSM3P62310 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM3P62310 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.64□□□□□ -1.99
LSM3P62310 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM3P62310 ZNF192P1-203ENST00000565888 810 ntBASIC2.64□□□□□ -1.99
LSM3P62310 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM3P62310 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM3P62310 AC005972.3-201ENST00000606304 481 ntBASIC2.64□□□□□ -1.99
LSM3P62310 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM3P62310 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM3P62310 AC009464.1-201ENST00000615731 469 ntBASIC2.64□□□□□ -1.99
LSM3P62310 Z99129.2-201ENST00000619967 314 ntBASIC2.64□□□□□ -1.99
LSM3P62310 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.64□□□□□ -1.99
LSM3P62310 AP003072.5-201ENST00000623872 773 ntBASIC2.64□□□□□ -1.99
LSM3P62310 RNA5SP196-201ENST00000625967 102 ntBASIC2.64□□□□□ -1.99
LSM3P62310 FAM35BP-202ENST00000497389 3337 ntBASIC2.64□□□□□ -1.99
LSM3P62310 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 AL133383.2-201ENST00000622958 2336 ntBASIC2.64□□□□□ -1.99
LSM3P62310 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM3P62310 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM3P62310 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM3P62310 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM3P62310 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM3P62310 AC073325.2-201ENST00000339545 159 ntBASIC2.63□□□□□ -1.99
LSM3P62310 RNU6-697P-201ENST00000363348 107 ntBASIC2.63□□□□□ -1.99
LSM3P62310 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM3P62310 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LSM3P62310 HMGB1P13-201ENST00000406019 642 ntBASIC2.63□□□□□ -1.99
LSM3P62310 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.63□□□□□ -1.99
LSM3P62310 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM3P62310 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.63□□□□□ -1.99
LSM3P62310 ELOCP6-201ENST00000429066 328 ntBASIC2.63□□□□□ -1.99
LSM3P62310 KCTD10P1-201ENST00000434203 625 ntBASIC2.63□□□□□ -1.99
LSM3P62310 AC122718.1-201ENST00000439448 744 ntBASIC2.63□□□□□ -1.99
LSM3P62310 RPL21P2-201ENST00000440049 481 ntBASIC2.63□□□□□ -1.99
LSM3P62310 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM3P62310 AC239367.2-201ENST00000447309 705 ntBASIC2.63□□□□□ -1.99
LSM3P62310 RPL7P59-201ENST00000447700 943 ntBASIC2.63□□□□□ -1.99
LSM3P62310 NPM1P49-201ENST00000448027 714 ntBASIC2.63□□□□□ -1.99
LSM3P62310 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM3P62310 ELOCP12-201ENST00000458706 328 ntBASIC2.63□□□□□ -1.99
LSM3P62310 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms