Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC012314.7-201ENST00000619693 93 ntBASIC3.37□□□□□ -1.87
VSX2P58304 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 MTCO1P12-201ENST00000414273 1543 ntBASIC3.37□□□□□ -1.87
VSX2P58304 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VSX2P58304 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.36□□□□□ -1.87
VSX2P58304 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
VSX2P58304 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
VSX2P58304 RNA5SP391-201ENST00000363456 119 ntBASIC3.36□□□□□ -1.87
VSX2P58304 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AL356057.1-202ENST00000402263 756 ntBASIC3.36□□□□□ -1.87
VSX2P58304 MTATP6P31-201ENST00000406985 692 ntBASIC3.36□□□□□ -1.87
VSX2P58304 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
VSX2P58304 RN7SKP53-201ENST00000411337 315 ntBASIC3.36□□□□□ -1.87
VSX2P58304 RNU2-6P-201ENST00000411404 190 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AC069218.2-201ENST00000411665 344 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AC004022.2-201ENST00000413824 193 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AC023128.2-201ENST00000420880 1223 ntBASIC3.36□□□□□ -1.87
VSX2P58304 MORF4L1P7-201ENST00000426038 703 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 MTND4LP14-201ENST00000429447 288 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AL138799.3-201ENST00000438968 350 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AC092641.1-201ENST00000440229 772 ntBASIC3.36□□□□□ -1.87
VSX2P58304 TXNP1-201ENST00000441872 371 ntBASIC3.36□□□□□ -1.87
VSX2P58304 ARL5AP2-201ENST00000444698 533 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 CYCSP35-201ENST00000451978 304 ntBASIC3.36□□□□□ -1.87
VSX2P58304 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.36□□□□□ -1.87
VSX2P58304 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
VSX2P58304 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.36□□□□□ -1.87
VSX2P58304 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 OR5H4P-201ENST00000510851 923 ntBASIC3.36□□□□□ -1.87
VSX2P58304 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.36□□□□□ -1.87
VSX2P58304 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 POLR2KP1-201ENST00000553226 168 ntBASIC3.36□□□□□ -1.87
VSX2P58304 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.36□□□□□ -1.87
VSX2P58304 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 AC006270.2-201ENST00000578523 652 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.36□□□□□ -1.87
VSX2P58304 PCNAP1-202ENST00000595299 752 ntBASIC3.36□□□□□ -1.87
VSX2P58304 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
VSX2P58304 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 AC104307.1-201ENST00000616142 196 ntBASIC3.36□□□□□ -1.87
VSX2P58304 U6.48-201ENST00000618523 106 ntBASIC3.36□□□□□ -1.87
VSX2P58304 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 AC090617.9-201ENST00000623751 147 ntBASIC3.36□□□□□ -1.87
VSX2P58304 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.36□□□□□ -1.87
VSX2P58304 AC138649.5-201ENST00000637456 137 ntBASIC3.36□□□□□ -1.87
VSX2P58304 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 CEP170P1-201ENST00000502249 4587 ntBASIC3.36□□□□□ -1.87
VSX2P58304 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VSX2P58304 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
VSX2P58304 GABPAP-201ENST00000419271 1356 ntBASIC3.36□□□□□ -1.87
VSX2P58304 AP001148.1-201ENST00000624124 2359 ntBASIC3.36□□□□□ -1.87
VSX2P58304 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.35□□□□□ -1.87
VSX2P58304 RNU6-252P-201ENST00000363232 107 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RNA5SP50-201ENST00000363731 107 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RNA5SP387-201ENST00000364226 106 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RNA5SP167-201ENST00000365461 116 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RNU6-1005P-201ENST00000384519 107 ntBASIC3.35□□□□□ -1.87
VSX2P58304 MIR23A-201ENST00000385245 73 ntBASIC3.35□□□□□ -1.87
VSX2P58304 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.35□□□□□ -1.87
VSX2P58304 SNORA11.1-201ENST00000408133 129 ntBASIC3.35□□□□□ -1.87
VSX2P58304 MIR1303-201ENST00000408625 86 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RN7SKP285-201ENST00000410137 318 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AL049610.1-201ENST00000423374 372 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
VSX2P58304 ATP5JP1-201ENST00000431631 322 ntBASIC3.35□□□□□ -1.87
VSX2P58304 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.35□□□□□ -1.87
VSX2P58304 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
VSX2P58304 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.35□□□□□ -1.87
VSX2P58304 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.35□□□□□ -1.87
VSX2P58304 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.35□□□□□ -1.87
VSX2P58304 PRSS3P4-201ENST00000453323 162 ntBASIC3.35□□□□□ -1.87
VSX2P58304 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VSX2P58304 U3.44-201ENST00000458938 192 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RPL23AP14-201ENST00000468281 468 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC023598.1-201ENST00000472521 361 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
VSX2P58304 TMED11P-201ENST00000479478 690 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RPL23AP73-201ENST00000492507 471 ntBASIC3.35□□□□□ -1.87
VSX2P58304 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
VSX2P58304 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.35□□□□□ -1.87
VSX2P58304 OR5AK3P-201ENST00000527486 1297 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms