Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.06□□□□□ -1.6
GFRA1P56159 COX6CP3-201ENST00000580869 223 ntBASIC5.06□□□□□ -1.6
GFRA1P56159 MIR3176-201ENST00000582210 90 ntBASIC5.06□□□□□ -1.6
GFRA1P56159 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.06□□□□□ -1.6
GFRA1P56159 AC113194.1-201ENST00000606037 500 ntBASIC5.06□□□□□ -1.6
GFRA1P56159 AC109309.2-201ENST00000612597 332 ntBASIC5.06□□□□□ -1.6
GFRA1P56159 AC022467.1-201ENST00000614738 749 ntBASIC5.06□□□□□ -1.6
GFRA1P56159 AC025574.2-201ENST00000615621 514 ntBASIC5.06□□□□□ -1.6
GFRA1P56159 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.06□□□□□ -1.6
GFRA1P56159 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.06□□□□□ -1.6
GFRA1P56159 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.06□□□□□ -1.6
GFRA1P56159 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
GFRA1P56159 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.06□□□□□ -1.6
GFRA1P56159 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
GFRA1P56159 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
GFRA1P56159 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
GFRA1P56159 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GFRA1P56159 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 OR1S2-201ENST00000302592 978 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 Y_RNA.142-201ENST00000363491 102 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 RN7SKP160-201ENST00000363804 340 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 U3.29-201ENST00000391296 212 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 RNU6-1068P-201ENST00000410958 103 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 HMGN1P24-201ENST00000412282 298 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 RPL12P9-201ENST00000412942 488 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC008065.1-201ENST00000428525 348 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AL627308.1-201ENST00000435693 821 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC019185.1-201ENST00000442718 389 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 RAC1P7-201ENST00000445367 377 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 DDX3P2-201ENST00000446138 111 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 BX842559.2-201ENST00000451418 605 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 MTND1P9-201ENST00000453775 944 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 SNORD121B-201ENST00000458838 81 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC018638.3-201ENST00000461273 132 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AL049714.1-201ENST00000466686 347 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC087385.1-201ENST00000475062 312 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 HMGB1P21-201ENST00000502313 581 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.05□□□□□ -1.6
GFRA1P56159 PCBP2P3-201ENST00000509726 843 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.05□□□□□ -1.6
GFRA1P56159 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 SNORD60.2-201ENST00000516883 86 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 RN7SKP277-201ENST00000516895 283 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.05□□□□□ -1.6
GFRA1P56159 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.05□□□□□ -1.6
GFRA1P56159 ARL2BPP2-201ENST00000550907 489 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC079075.1-201ENST00000559543 878 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 RPL21P12-201ENST00000559810 515 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AL138976.2-201ENST00000563989 694 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC105224.1-201ENST00000587055 421 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC018638.8-201ENST00000588755 281 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AC060780.2-201ENST00000589047 198 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 AL512782.1-201ENST00000603093 364 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.05□□□□□ -1.6
GFRA1P56159 AC007742.2-201ENST00000618226 398 ntBASIC5.05□□□□□ -1.6
GFRA1P56159 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.05□□□□□ -1.6
GFRA1P56159 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA1P56159 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
GFRA1P56159 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
GFRA1P56159 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 AC108467.2-201ENST00000617640 1597 ntBASIC5.04□□□□□ -1.6
GFRA1P56159 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
GFRA1P56159 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA1P56159 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms