Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPS4XP8-201ENST00000402039 771 ntBASIC3.64□□□□□ -1.83
NUP98P52948 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP98P52948 RNU2-52P-201ENST00000410680 190 ntBASIC3.64□□□□□ -1.83
NUP98P52948 VN1R51P-201ENST00000411675 945 ntBASIC3.64□□□□□ -1.83
NUP98P52948 RPS26P40-201ENST00000435209 294 ntBASIC3.64□□□□□ -1.83
NUP98P52948 RPL12P46-201ENST00000436610 195 ntBASIC3.64□□□□□ -1.83
NUP98P52948 AC083906.5-201ENST00000503722 328 ntBASIC3.64□□□□□ -1.83
NUP98P52948 SETP12-201ENST00000514068 805 ntBASIC3.64□□□□□ -1.83
NUP98P52948 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.64□□□□□ -1.83
NUP98P52948 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
NUP98P52948 AL713922.2-201ENST00000619384 716 ntBASIC3.64□□□□□ -1.83
NUP98P52948 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP98P52948 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
NUP98P52948 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.63□□□□□ -1.83
NUP98P52948 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP98P52948 CYCSP20-201ENST00000473154 315 ntBASIC3.63□□□□□ -1.83
NUP98P52948 SNORA64.4-201ENST00000516632 81 ntBASIC3.63□□□□□ -1.83
NUP98P52948 RN7SKP272-201ENST00000516988 232 ntBASIC3.63□□□□□ -1.83
NUP98P52948 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP98P52948 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP98P52948 AC007424.1-203ENST00000554613 687 ntBASIC3.63□□□□□ -1.83
NUP98P52948 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP98P52948 AC103881.1-201ENST00000603476 538 ntBASIC3.63□□□□□ -1.83
NUP98P52948 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP98P52948 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP98P52948 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUP98P52948 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP98P52948 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
NUP98P52948 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NUP98P52948 RNU1-75P-201ENST00000347264 129 ntBASIC3.63□□□□□ -1.83
NUP98P52948 NACA3P-201ENST00000359690 648 ntBASIC3.63□□□□□ -1.83
NUP98P52948 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.63□□□□□ -1.83
NUP98P52948 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUP98P52948 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.63□□□□□ -1.83
NUP98P52948 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.63□□□□□ -1.83
NUP98P52948 AL365503.1-201ENST00000605247 905 ntBASIC3.63□□□□□ -1.83
NUP98P52948 AC116312.1-201ENST00000606841 314 ntBASIC3.63□□□□□ -1.83
NUP98P52948 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP98P52948 ASNSP1-201ENST00000518311 1939 ntBASIC3.62□□□□□ -1.83
NUP98P52948 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NUP98P52948 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP98P52948 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP98P52948 AL356057.1-202ENST00000402263 756 ntBASIC3.62□□□□□ -1.83
NUP98P52948 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP98P52948 SNORD109B-201ENST00000458961 67 ntBASIC3.62□□□□□ -1.83
NUP98P52948 SNORD109A-201ENST00000459128 67 ntBASIC3.62□□□□□ -1.83
NUP98P52948 RN7SL432P-201ENST00000484057 298 ntBASIC3.62□□□□□ -1.83
NUP98P52948 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP98P52948 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.62□□□□□ -1.83
NUP98P52948 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP98P52948 SPATA2P1-201ENST00000431223 2055 ntBASIC3.62□□□□□ -1.83
NUP98P52948 AC093908.1-201ENST00000623125 8092 ntBASIC3.62□□□□□ -1.83
NUP98P52948 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP98P52948 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP98P52948 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP98P52948 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP98P52948 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 SNORA46-201ENST00000384762 135 ntBASIC3.61□□□□□ -1.83
NUP98P52948 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP98P52948 RPL31P12-201ENST00000422587 358 ntBASIC3.61□□□□□ -1.83
NUP98P52948 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP98P52948 RNU7-157P-201ENST00000459600 66 ntBASIC3.61□□□□□ -1.83
NUP98P52948 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.61□□□□□ -1.83
NUP98P52948 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP98P52948 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP98P52948 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP98P52948 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP98P52948 SRP72P2-201ENST00000344851 1979 ntBASIC3.61□□□□□ -1.83
NUP98P52948 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP98P52948 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP98P52948 RNU6-301P-201ENST00000384277 107 ntBASIC3.6□□□□□ -1.83
NUP98P52948 MIR34A-201ENST00000385130 110 ntBASIC3.6□□□□□ -1.83
NUP98P52948 RNA5SP21-201ENST00000410917 96 ntBASIC3.6□□□□□ -1.83
NUP98P52948 AL160175.1-201ENST00000428124 247 ntBASIC3.6□□□□□ -1.83
NUP98P52948 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP98P52948 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP98P52948 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP98P52948 AC006539.3-201ENST00000454258 129 ntBASIC3.6□□□□□ -1.83
NUP98P52948 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP98P52948 ST13P14-201ENST00000474095 734 ntBASIC3.6□□□□□ -1.83
NUP98P52948 AC090525.1-201ENST00000479116 478 ntBASIC3.6□□□□□ -1.83
NUP98P52948 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP98P52948 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP98P52948 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP98P52948 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NUP98P52948 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP98P52948 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
NUP98P52948 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NUP98P52948 AL359693.1-201ENST00000614959 2407 ntBASIC3.6□□□□□ -1.83
NUP98P52948 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NUP98P52948 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP98P52948 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP98P52948 AC006960.1-201ENST00000419980 153 ntBASIC3.6□□□□□ -1.83
NUP98P52948 PTP4A1P1-201ENST00000420539 515 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms