Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MSH6P52701 OR56A5-201ENST00000340110 738 ntBASIC4.44□□□□□ -1.7
MSH6P52701 RN7SKP220-201ENST00000410611 288 ntBASIC4.44□□□□□ -1.7
MSH6P52701 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.44□□□□□ -1.7
MSH6P52701 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH6P52701 MTCO3P16-201ENST00000454456 754 ntBASIC4.44□□□□□ -1.7
MSH6P52701 AC087312.1-201ENST00000471411 480 ntBASIC4.44□□□□□ -1.7
MSH6P52701 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.44□□□□□ -1.7
MSH6P52701 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH6P52701 AF186190.1-201ENST00000517470 480 ntBASIC4.44□□□□□ -1.7
MSH6P52701 NPM1P52-201ENST00000518264 846 ntBASIC4.44□□□□□ -1.7
MSH6P52701 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.44□□□□□ -1.7
MSH6P52701 AC078899.5-201ENST00000612475 178 ntBASIC4.44□□□□□ -1.7
MSH6P52701 AC100793.4-201ENST00000613683 429 ntBASIC4.44□□□□□ -1.7
MSH6P52701 MIR622-201ENST00000638396 96 ntBASIC4.44□□□□□ -1.7
MSH6P52701 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
MSH6P52701 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MSH6P52701 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MSH6P52701 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.43□□□□□ -1.7
MSH6P52701 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MSH6P52701 RNA5SP229-201ENST00000410809 99 ntBASIC4.43□□□□□ -1.7
MSH6P52701 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.43□□□□□ -1.7
MSH6P52701 ZYG11AP1-201ENST00000430329 837 ntBASIC4.43□□□□□ -1.7
MSH6P52701 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.43□□□□□ -1.7
MSH6P52701 AC008264.1-201ENST00000447612 367 ntBASIC4.43□□□□□ -1.7
MSH6P52701 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MSH6P52701 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.43□□□□□ -1.7
MSH6P52701 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.43□□□□□ -1.7
MSH6P52701 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
MSH6P52701 RN7SKP132-201ENST00000516001 208 ntBASIC4.43□□□□□ -1.7
MSH6P52701 AC084033.1-201ENST00000550830 633 ntBASIC4.43□□□□□ -1.7
MSH6P52701 ATP1B3P1-201ENST00000605365 821 ntBASIC4.43□□□□□ -1.7
MSH6P52701 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.43□□□□□ -1.7
MSH6P52701 AL096803.3-201ENST00000609032 532 ntBASIC4.43□□□□□ -1.7
MSH6P52701 AC087241.4-201ENST00000612441 480 ntBASIC4.43□□□□□ -1.7
MSH6P52701 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
MSH6P52701 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MSH6P52701 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MSH6P52701 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.43□□□□□ -1.7
MSH6P52701 HSPA8P1-201ENST00000425843 1833 ntBASIC4.42□□□□□ -1.7
MSH6P52701 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MSH6P52701 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MSH6P52701 AC013470.3-201ENST00000420252 1194 ntBASIC4.42□□□□□ -1.7
MSH6P52701 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.42□□□□□ -1.7
MSH6P52701 AL357552.1-201ENST00000445254 415 ntBASIC4.42□□□□□ -1.7
MSH6P52701 AC112492.1-201ENST00000449607 712 ntBASIC4.42□□□□□ -1.7
MSH6P52701 ELOCP23-201ENST00000452014 332 ntBASIC4.42□□□□□ -1.7
MSH6P52701 SEPT7P6-201ENST00000469999 1143 ntBASIC4.42□□□□□ -1.7
MSH6P52701 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.42□□□□□ -1.7
MSH6P52701 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.42□□□□□ -1.7
MSH6P52701 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
MSH6P52701 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.42□□□□□ -1.7
MSH6P52701 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.42□□□□□ -1.7
MSH6P52701 EIF5A2P1-201ENST00000564027 460 ntBASIC4.42□□□□□ -1.7
MSH6P52701 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.42□□□□□ -1.7
MSH6P52701 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.42□□□□□ -1.7
MSH6P52701 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
MSH6P52701 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
MSH6P52701 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MSH6P52701 AL031679.1-201ENST00000400616 525 ntBASIC4.41□□□□□ -1.7
MSH6P52701 DDX18P3-201ENST00000404856 2007 ntBASIC4.41□□□□□ -1.7
MSH6P52701 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.41□□□□□ -1.7
MSH6P52701 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.41□□□□□ -1.7
MSH6P52701 MTCO1P51-201ENST00000427672 1060 ntBASIC4.41□□□□□ -1.7
MSH6P52701 AL138787.1-202ENST00000437804 898 ntBASIC4.41□□□□□ -1.7
MSH6P52701 AL109933.2-201ENST00000452651 260 ntBASIC4.41□□□□□ -1.7
MSH6P52701 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.41□□□□□ -1.7
MSH6P52701 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.41□□□□□ -1.7
MSH6P52701 FCF1P3-201ENST00000496394 590 ntBASIC4.41□□□□□ -1.7
MSH6P52701 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.41□□□□□ -1.7
MSH6P52701 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.41□□□□□ -1.7
MSH6P52701 AC107918.3-201ENST00000533272 382 ntBASIC4.41□□□□□ -1.7
MSH6P52701 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.41□□□□□ -1.7
MSH6P52701 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.41□□□□□ -1.7
MSH6P52701 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.41□□□□□ -1.7
MSH6P52701 HMGB1P6-201ENST00000569046 646 ntBASIC4.41□□□□□ -1.7
MSH6P52701 VN1R90P-201ENST00000595717 726 ntBASIC4.41□□□□□ -1.7
MSH6P52701 CYCSP41-201ENST00000616920 296 ntBASIC4.41□□□□□ -1.7
MSH6P52701 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
MSH6P52701 AP003499.2-201ENST00000624100 483 ntBASIC4.41□□□□□ -1.7
MSH6P52701 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSH6P52701 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.41□□□□□ -1.7
MSH6P52701 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.41□□□□□ -1.7
MSH6P52701 AL645568.2-201ENST00000432815 1337 ntBASIC4.41□□□□□ -1.7
MSH6P52701 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSH6P52701 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
MSH6P52701 AL513302.2-201ENST00000562313 1842 ntBASIC4.41□□□□□ -1.7
MSH6P52701 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
MSH6P52701 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.4□□□□□ -1.7
MSH6P52701 RHEBP3-201ENST00000411920 351 ntBASIC4.4□□□□□ -1.7
MSH6P52701 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.4□□□□□ -1.7
MSH6P52701 AC012065.2-201ENST00000421295 375 ntBASIC4.4□□□□□ -1.7
MSH6P52701 MTND6P18-201ENST00000439477 513 ntBASIC4.4□□□□□ -1.7
MSH6P52701 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.4□□□□□ -1.7
MSH6P52701 AL513124.1-201ENST00000450410 614 ntBASIC4.4□□□□□ -1.7
MSH6P52701 AC108938.1-201ENST00000451204 136 ntBASIC4.4□□□□□ -1.7
MSH6P52701 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MSH6P52701 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.4□□□□□ -1.7
MSH6P52701 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
MSH6P52701 AL139174.1-201ENST00000531489 886 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms