Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.01□□□□□ -1.45
USP11P51784 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.01□□□□□ -1.45
USP11P51784 AC006504.6-201ENST00000590142 199 ntBASIC6.01□□□□□ -1.45
USP11P51784 AC090525.3-201ENST00000605601 189 ntBASIC6.01□□□□□ -1.45
USP11P51784 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.01□□□□□ -1.45
USP11P51784 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.01□□□□□ -1.45
USP11P51784 AC024940.5-201ENST00000622889 474 ntBASIC6.01□□□□□ -1.45
USP11P51784 AC134503.1-201ENST00000633048 54 ntBASIC6.01□□□□□ -1.45
USP11P51784 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USP11P51784 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
USP11P51784 CKAP2P1-201ENST00000555477 2049 ntBASIC6.01□□□□□ -1.45
USP11P51784 AL359922.3-201ENST00000624779 1670 ntBASIC6.01□□□□□ -1.45
USP11P51784 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.01□□□□□ -1.45
USP11P51784 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 AC011493.1-201ENST00000596753 1632 ntBASIC6□□□□□ -1.45
USP11P51784 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6□□□□□ -1.45
USP11P51784 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
USP11P51784 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
USP11P51784 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6□□□□□ -1.45
USP11P51784 SNRPEP3-201ENST00000338402 276 ntBASIC6□□□□□ -1.45
USP11P51784 RNU1-39P-201ENST00000383897 165 ntBASIC6□□□□□ -1.45
USP11P51784 RNU6-171P-201ENST00000384354 107 ntBASIC6□□□□□ -1.45
USP11P51784 MIR105-1-201ENST00000385222 81 ntBASIC6□□□□□ -1.45
USP11P51784 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6□□□□□ -1.45
USP11P51784 TMSB4XP8-201ENST00000402089 135 ntBASIC6□□□□□ -1.45
USP11P51784 MIR1178-201ENST00000408396 91 ntBASIC6□□□□□ -1.45
USP11P51784 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6□□□□□ -1.45
USP11P51784 TMSB4XP6-201ENST00000415187 135 ntBASIC6□□□□□ -1.45
USP11P51784 TMSB4XP1-201ENST00000424567 135 ntBASIC6□□□□□ -1.45
USP11P51784 VTI1BP4-201ENST00000427516 527 ntBASIC6□□□□□ -1.45
USP11P51784 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6□□□□□ -1.45
USP11P51784 RPL5P25-201ENST00000441148 775 ntBASIC6□□□□□ -1.45
USP11P51784 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6□□□□□ -1.45
USP11P51784 Z92846.1-201ENST00000456203 268 ntBASIC6□□□□□ -1.45
USP11P51784 AC097493.1-201ENST00000463958 372 ntBASIC6□□□□□ -1.45
USP11P51784 AC083798.1-201ENST00000472671 131 ntBASIC6□□□□□ -1.45
USP11P51784 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6□□□□□ -1.45
USP11P51784 AC072052.1-201ENST00000496556 306 ntBASIC6□□□□□ -1.45
USP11P51784 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6□□□□□ -1.45
USP11P51784 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6□□□□□ -1.45
USP11P51784 AC127381.1-201ENST00000555979 939 ntBASIC6□□□□□ -1.45
USP11P51784 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6□□□□□ -1.45
USP11P51784 AC068714.1-201ENST00000559623 800 ntBASIC6□□□□□ -1.45
USP11P51784 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6□□□□□ -1.45
USP11P51784 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6□□□□□ -1.45
USP11P51784 AL022394.1-201ENST00000606979 292 ntBASIC6□□□□□ -1.45
USP11P51784 AL451049.1-201ENST00000608672 497 ntBASIC6□□□□□ -1.45
USP11P51784 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6□□□□□ -1.45
USP11P51784 AC026634.1-201ENST00000634369 198 ntBASIC6□□□□□ -1.45
USP11P51784 AC100810.6-201ENST00000638068 285 ntBASIC6□□□□□ -1.45
USP11P51784 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6□□□□□ -1.45
USP11P51784 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6□□□□□ -1.45
USP11P51784 AC092747.4-201ENST00000620519 1861 ntBASIC6□□□□□ -1.45
USP11P51784 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
USP11P51784 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP11P51784 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.99□□□□□ -1.45
USP11P51784 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP11P51784 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP11P51784 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USP11P51784 OR9K1P-201ENST00000326513 941 ntBASIC5.99□□□□□ -1.45
USP11P51784 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
USP11P51784 RNU6-474P-201ENST00000384243 107 ntBASIC5.99□□□□□ -1.45
USP11P51784 Y_RNA.474-201ENST00000384341 102 ntBASIC5.99□□□□□ -1.45
USP11P51784 RNU6-1068P-201ENST00000410958 103 ntBASIC5.99□□□□□ -1.45
USP11P51784 AC079809.1-201ENST00000415468 276 ntBASIC5.99□□□□□ -1.45
USP11P51784 MTCO3P46-201ENST00000425787 232 ntBASIC5.99□□□□□ -1.45
USP11P51784 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.99□□□□□ -1.45
USP11P51784 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.99□□□□□ -1.45
USP11P51784 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.99□□□□□ -1.45
USP11P51784 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.99□□□□□ -1.45
USP11P51784 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.99□□□□□ -1.45
USP11P51784 AC017015.1-201ENST00000477387 286 ntBASIC5.99□□□□□ -1.45
USP11P51784 RPS3AP50-201ENST00000487064 803 ntBASIC5.99□□□□□ -1.45
USP11P51784 AC006427.1-201ENST00000514359 712 ntBASIC5.99□□□□□ -1.45
USP11P51784 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.99□□□□□ -1.45
USP11P51784 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.99□□□□□ -1.45
USP11P51784 OR8A2P-201ENST00000528631 952 ntBASIC5.99□□□□□ -1.45
USP11P51784 ELOCP31-201ENST00000540463 467 ntBASIC5.99□□□□□ -1.45
USP11P51784 AL109766.1-201ENST00000555080 552 ntBASIC5.99□□□□□ -1.45
USP11P51784 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.99□□□□□ -1.45
USP11P51784 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.99□□□□□ -1.45
USP11P51784 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.99□□□□□ -1.45
USP11P51784 AC124303.1-201ENST00000605703 360 ntBASIC5.99□□□□□ -1.45
USP11P51784 AC126915.2-201ENST00000610957 190 ntBASIC5.99□□□□□ -1.45
USP11P51784 AL713922.2-201ENST00000619384 716 ntBASIC5.99□□□□□ -1.45
USP11P51784 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.99□□□□□ -1.45
USP11P51784 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.99□□□□□ -1.45
USP11P51784 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.99□□□□□ -1.45
USP11P51784 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms