Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD12P35452 VN1R90P-201ENST00000595717 726 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXD12P35452 AC073091.2-201ENST00000603205 907 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 AC103881.1-201ENST00000603476 538 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 AC090948.1-201ENST00000607464 549 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 AC091979.2-201ENST00000607514 214 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 AL133243.1-201ENST00000614487 366 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD12P35452 AC073348.1-201ENST00000623002 331 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD12P35452 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD12P35452 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
HOXD12P35452 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD12P35452 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD12P35452 SAGE4P-201ENST00000442271 3381 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 AL122126.1-201ENST00000546905 1318 ntBASIC4.68□□□□□ -1.66
HOXD12P35452 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD12P35452 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD12P35452 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD12P35452 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD12P35452 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HOXD12P35452 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HOXD12P35452 RAD17P1-201ENST00000418130 2042 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC087359.1-201ENST00000508335 1740 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC017104.4-201ENST00000636283 1592 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AL391994.1-201ENST00000254724 282 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXD12P35452 MIR448-201ENST00000362131 111 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 RNU6-1066P-201ENST00000363573 105 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 RNU6-1243P-201ENST00000364028 107 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 RNU1-85P-201ENST00000364127 164 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 Y_RNA.311-201ENST00000365068 96 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 SNORA70C-201ENST00000384538 135 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 Y_RNA.560-201ENST00000384689 102 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AL133264.1-201ENST00000407157 562 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 MIR1250-201ENST00000408098 113 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 BTF3L4P1-201ENST00000413813 468 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 AL356387.2-201ENST00000422272 243 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AL050321.1-201ENST00000432363 400 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC092162.1-201ENST00000432828 434 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC010881.1-201ENST00000433830 235 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AL034418.1-201ENST00000448675 860 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC009961.3-201ENST00000449832 765 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD12P35452 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD12P35452 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 RN7SL303P-201ENST00000469773 251 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 AC087879.1-201ENST00000474343 374 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 SLC25A15P5-201ENST00000508033 253 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 AC007016.1-201ENST00000512110 244 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 MTND5P13-201ENST00000513046 1079 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD12P35452 RNU6-885P-201ENST00000516607 104 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AP000827.1-201ENST00000527814 258 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AP001781.1-201ENST00000530977 207 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 OR6C73P-201ENST00000546432 358 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXD12P35452 AC068831.4-201ENST00000556118 109 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD12P35452 MIR3915-201ENST00000578518 97 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 MIR1254-2-201ENST00000579553 63 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 MIR3939-201ENST00000582614 106 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC007566.2-201ENST00000603642 413 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC012409.3-201ENST00000611343 981 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD12P35452 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD12P35452 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 DCAF13P1-201ENST00000495256 1330 ntBASIC4.67□□□□□ -1.66
HOXD12P35452 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXD12P35452 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD12P35452 ELL2P4-201ENST00000446870 1376 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD12P35452 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD12P35452 AC011266.1-201ENST00000624119 3569 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD12P35452 RNU5D-1-201ENST00000363299 116 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 RNU6-931P-201ENST00000363850 107 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 RNA5SP515-201ENST00000364570 118 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD12P35452 ENSAP1-201ENST00000392855 326 ntBASIC4.66□□□□□ -1.66
HOXD12P35452 U3.32-201ENST00000408116 212 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms