Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXC12P31275 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXC12P31275 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 AC005005.4-201ENST00000623789 16698 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC12P31275 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC12P31275 Y_RNA.263-201ENST00000364659 114 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 Y_RNA.279-201ENST00000364763 95 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 RNU6-1011P-201ENST00000384668 107 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 AL049697.2-201ENST00000403708 294 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AL121835.1-201ENST00000404250 354 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 RNU2-9P-201ENST00000410194 145 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 RNU2-15P-201ENST00000410692 191 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC12P31275 OR9R1P-201ENST00000412200 877 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AL354890.1-201ENST00000413730 346 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 RPS15AP40-201ENST00000419621 391 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AL358176.3-201ENST00000420757 454 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AL136231.1-201ENST00000429407 730 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 RPL23AP30-201ENST00000432419 501 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 GPR143P-201ENST00000434155 205 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 HMGB3P9-201ENST00000441799 583 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 SLC25A18P1-201ENST00000449385 454 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC12P31275 SDC4P-201ENST00000453285 601 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC12P31275 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 AP000942.1-201ENST00000463969 747 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 RPS4XP10-201ENST00000465034 731 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC010683.1-201ENST00000473673 378 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC021382.1-201ENST00000483523 359 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 MTCO2P30-201ENST00000503662 364 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC016065.2-201ENST00000514530 444 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC12P31275 RNA5SP337-201ENST00000517007 109 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC12P31275 IGLVIV-53-201ENST00000520107 367 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC12P31275 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 AL049779.3-201ENST00000557141 606 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC12P31275 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC12P31275 FO393422.1-201ENST00000603908 708 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC145423.1-201ENST00000605712 336 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC087045.1-201ENST00000605856 382 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AL445222.1-201ENST00000607259 628 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 AC138965.3-201ENST00000623875 498 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC12P31275 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC12P31275 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HOXC12P31275 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.16□□□□□ -1.58
HOXC12P31275 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC12P31275 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
HOXC12P31275 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.15□□□□□ -1.58
HOXC12P31275 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
HOXC12P31275 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
HOXC12P31275 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXC12P31275 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXC12P31275 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 RNVU1-3-201ENST00000364313 161 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 Y_RNA.356-201ENST00000365475 113 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC12P31275 SNORA69-201ENST00000383895 132 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 RPL35AP3-201ENST00000414680 288 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AL807761.1-201ENST00000417622 171 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXC12P31275 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 AC092832.1-201ENST00000422934 400 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 OR4F13P-201ENST00000428478 931 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HOXC12P31275 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXC12P31275 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC12P31275 MTCO2P29-201ENST00000465212 189 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC12P31275 AK3P4-201ENST00000504283 583 ntBASIC5.15□□□□□ -1.59
HOXC12P31275 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC12P31275 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXC12P31275 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms