Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A5P29400 VN1R78P-201ENST00000597393 564 ntBASIC3.51□□□□□ -1.85
COL4A5P29400 MIR7843-201ENST00000622274 79 ntBASIC3.51□□□□□ -1.85
COL4A5P29400 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.51□□□□□ -1.85
COL4A5P29400 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A5P29400 ASNSP3-201ENST00000451989 1306 ntBASIC3.51□□□□□ -1.85
COL4A5P29400 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A5P29400 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A5P29400 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A5P29400 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A5P29400 GLRXP1-201ENST00000423261 334 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 AC007563.3-201ENST00000433233 371 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 AC010095.1-201ENST00000443543 144 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 AL513124.1-201ENST00000450410 614 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 EEF1B2P7-201ENST00000451177 676 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.5□□□□□ -1.85
COL4A5P29400 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.5□□□□□ -1.85
COL4A5P29400 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.5□□□□□ -1.85
COL4A5P29400 AC009237.17-201ENST00000618111 748 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A5P29400 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.5□□□□□ -1.85
COL4A5P29400 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A5P29400 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A5P29400 RNU6-851P-201ENST00000384565 107 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 HMGB1P18-201ENST00000438801 619 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 NR1H5P-201ENST00000452683 1377 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.49□□□□□ -1.85
COL4A5P29400 AP001025.2-201ENST00000490908 477 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC017002.4-201ENST00000604721 1525 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AL590808.1-201ENST00000618696 141 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A5P29400 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A5P29400 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
COL4A5P29400 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A5P29400 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
COL4A5P29400 AL592494.2-201ENST00000425455 1548 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.49□□□□□ -1.85
COL4A5P29400 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A5P29400 RSL24D1P4-201ENST00000400938 484 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 MIR887-201ENST00000401258 79 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 U3.42-201ENST00000408746 214 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 RNU6-55P-201ENST00000411092 107 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 RNU6-954P-201ENST00000411355 107 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AC009963.1-201ENST00000417265 157 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A5P29400 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A5P29400 AL513328.1-201ENST00000446460 224 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AP000936.2-201ENST00000447151 681 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 HMGB1P16-201ENST00000447155 540 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 RPS20P22-201ENST00000473700 357 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.49□□□□□ -1.85
COL4A5P29400 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A5P29400 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC027176.1-201ENST00000560204 514 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A5P29400 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A5P29400 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A5P29400 AC006840.1-201ENST00000623069 542 ntBASIC3.49□□□□□ -1.85
COL4A5P29400 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A5P29400 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A5P29400 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A5P29400 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A5P29400 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A5P29400 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A5P29400 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A5P29400 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.48□□□□□ -1.85
COL4A5P29400 HSPE1P6-201ENST00000479457 291 ntBASIC3.48□□□□□ -1.85
COL4A5P29400 AC008549.1-201ENST00000512900 643 ntBASIC3.48□□□□□ -1.85
COL4A5P29400 WDR61-205ENST00000558459 884 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A5P29400 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A5P29400 MTND5P24-201ENST00000438892 1767 ntBASIC3.48□□□□□ -1.85
COL4A5P29400 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
COL4A5P29400 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
COL4A5P29400 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
COL4A5P29400 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A5P29400 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
COL4A5P29400 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A5P29400 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A5P29400 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.47□□□□□ -1.85
COL4A5P29400 ISCA1P2-201ENST00000438679 421 ntBASIC3.47□□□□□ -1.85
COL4A5P29400 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A5P29400 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A5P29400 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A5P29400 TGIF1P1-201ENST00000558095 802 ntBASIC3.47□□□□□ -1.85
COL4A5P29400 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A5P29400 AC233280.2-201ENST00000603917 1070 ntBASIC3.47□□□□□ -1.85
COL4A5P29400 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A5P29400 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A5P29400 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A5P29400 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A5P29400 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
COL4A5P29400 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A5P29400 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms