Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 MIR5685-201ENST00000579080 79 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN4P29074 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 AC007687.1-201ENST00000602704 304 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AC091488.1-201ENST00000604239 660 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AL136370.1-201ENST00000608166 691 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 AL592295.2-201ENST00000612578 206 ntBASIC3.86□□□□□ -1.79
PTPN4P29074 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN4P29074 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN4P29074 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN4P29074 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 SAGE4P-201ENST00000442271 3381 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 AC106871.1-201ENST00000568324 3102 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PTPN4P29074 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN4P29074 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN4P29074 AL691449.1-201ENST00000426570 421 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPN4P29074 AC012497.1-201ENST00000429392 575 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 UBE2V1P1-201ENST00000430836 445 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 Z77249.1-201ENST00000444622 1175 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 RPS29P31-201ENST00000446147 164 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 AC098824.1-201ENST00000453565 980 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 RPS4XP6-201ENST00000477670 797 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 RNU6-488P-201ENST00000515918 99 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.85□□□□□ -1.79
PTPN4P29074 HSPE1P5-201ENST00000561489 272 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 CCDC58P3-201ENST00000590792 430 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPN4P29074 BNIP3P4-201ENST00000604946 565 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AL139089.1-201ENST00000620372 975 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 AL109659.3-201ENST00000624985 950 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 AL138960.2-201ENST00000625145 535 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PTPN4P29074 OR6C71P-202ENST00000641886 1107 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPN4P29074 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTPN4P29074 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPN4P29074 MAPK10-372ENST00000641954 3413 ntBASIC3.85□□□□□ -1.79
PTPN4P29074 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
PTPN4P29074 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN4P29074 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PTPN4P29074 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
PTPN4P29074 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 EXOC5P1-201ENST00000510543 1969 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 RNU6-354P-201ENST00000383862 107 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 RNU6-610P-201ENST00000384264 107 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN4P29074 AL445183.3-201ENST00000414168 502 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 OR5BE1P-201ENST00000425977 939 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.84□□□□□ -1.79
PTPN4P29074 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN4P29074 AC006994.1-201ENST00000438212 839 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 RPS4XP4-201ENST00000443195 763 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 MTND1P33-201ENST00000446251 917 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 VN1R34P-201ENST00000447387 883 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 RPL23AP15-201ENST00000450202 459 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN4P29074 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.84□□□□□ -1.79
PTPN4P29074 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN4P29074 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN4P29074 RPL9P32-201ENST00000464118 620 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC092451.1-201ENST00000480211 153 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC092902.1-201ENST00000486999 259 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC104629.1-201ENST00000494226 508 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms