Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 VDAC1P3-201ENST00000434069 851 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 PPIAP17-201ENST00000438507 471 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC000041.1-201ENST00000439655 175 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 RPS26P15-201ENST00000488067 348 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 RNU6-1073P-201ENST00000517182 106 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC087369.1-201ENST00000520775 996 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 YPEL5P3-201ENST00000547227 352 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 ZNF192P1-203ENST00000565888 810 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 MTND4LP25-201ENST00000570218 163 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 MIR3690-201ENST00000580266 75 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 SNORD39.3-201ENST00000584451 71 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 RPL21P136-201ENST00000605378 396 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC068880.4-201ENST00000623082 495 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AC068254.2-201ENST00000623938 3577 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 AP002001.2-201ENST00000529025 1469 ntBASIC3.98□□□□□ -1.77
HLA-DPA1P20036 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPA1P20036 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 FAM91A3P-201ENST00000456826 2544 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC106871.1-201ENST00000568324 3102 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 UBE3AP2-201ENST00000429033 2259 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AP001350.1-201ENST00000601906 1524 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 BDP1P-201ENST00000582658 1990 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 MIR372-201ENST00000362225 67 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 RNU6-115P-201ENST00000364310 107 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AL583834.1-201ENST00000406943 343 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 HSFY1P1-201ENST00000423928 1178 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AL117339.2-201ENST00000430475 180 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 ATP5HP2-201ENST00000433885 485 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 CYCSP43-201ENST00000438233 310 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 RPL21P11-201ENST00000461458 483 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 RPL7P24-201ENST00000493052 752 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC091167.4-201ENST00000605079 184 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC120053.1-201ENST00000607706 736 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 RNA5SP196-201ENST00000625967 102 ntBASIC3.97□□□□□ -1.77
HLA-DPA1P20036 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPA1P20036 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 RNA5SP515-201ENST00000364570 118 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 RNU6-1181P-201ENST00000384191 106 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 SNORA57.1-201ENST00000391227 145 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 CRYBB2P1-203ENST00000415709 538 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 RPL21P66-201ENST00000426566 466 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 TBCAP1-201ENST00000436520 327 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPA1P20036 RPL23AP2-201ENST00000471227 466 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 VN1R17P-201ENST00000472048 1090 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 AL136126.1-201ENST00000473603 402 ntBASIC3.96□□□□□ -1.78
HLA-DPA1P20036 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms