Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 AC119744.1-201ENST00000454746 1715 ntBASIC6.11□□□□□ -1.43
LIG1P18858 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIG1P18858 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIG1P18858 OR9K1P-201ENST00000326513 941 ntBASIC6.11□□□□□ -1.43
LIG1P18858 RNU6-251P-201ENST00000363235 104 ntBASIC6.11□□□□□ -1.43
LIG1P18858 RN7SKP6-201ENST00000364795 319 ntBASIC6.11□□□□□ -1.43
LIG1P18858 Y_RNA.326-201ENST00000365176 113 ntBASIC6.11□□□□□ -1.43
LIG1P18858 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.11□□□□□ -1.43
LIG1P18858 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.11□□□□□ -1.43
LIG1P18858 RNU6-908P-201ENST00000410160 94 ntBASIC6.11□□□□□ -1.43
LIG1P18858 RN7SKP266-201ENST00000410232 287 ntBASIC6.11□□□□□ -1.43
LIG1P18858 RNA5SP118-201ENST00000410385 109 ntBASIC6.11□□□□□ -1.43
LIG1P18858 RSU1P3-201ENST00000412878 835 ntBASIC6.11□□□□□ -1.43
LIG1P18858 SPA17P1-201ENST00000416656 452 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 COX6CP17-201ENST00000421389 185 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 ISCA1P6-201ENST00000427740 390 ntBASIC6.11□□□□□ -1.43
LIG1P18858 LSM1P1-201ENST00000438629 273 ntBASIC6.11□□□□□ -1.43
LIG1P18858 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.11□□□□□ -1.43
LIG1P18858 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 AC108161.1-201ENST00000461060 402 ntBASIC6.11□□□□□ -1.43
LIG1P18858 RNU6-150P-201ENST00000516237 95 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 AP004607.2-201ENST00000533949 322 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.11□□□□□ -1.43
LIG1P18858 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.11□□□□□ -1.43
LIG1P18858 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 AC007424.1-203ENST00000554613 687 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.11□□□□□ -1.43
LIG1P18858 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIG1P18858 AC015720.2-201ENST00000567709 334 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.11□□□□□ -1.43
LIG1P18858 AC012616.1-201ENST00000600294 197 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC011816.2-201ENST00000607089 556 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC090948.2-201ENST00000607363 564 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AP001521.1-201ENST00000609150 300 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC109309.2-201ENST00000612597 332 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AC243773.3-201ENST00000613270 256 ntBASIC6.11□□□□□ -1.43
LIG1P18858 AL118522.2-201ENST00000616045 615 ntBASIC6.11□□□□□ -1.43
LIG1P18858 MIR6826-201ENST00000617808 98 ntBASIC6.11□□□□□ -1.43
LIG1P18858 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIG1P18858 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 AC004817.4-201ENST00000602396 3625 ntBASIC6.11□□□□□ -1.43
LIG1P18858 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.11□□□□□ -1.43
LIG1P18858 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 FRG1BP-201ENST00000278882 761 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC011155.1-201ENST00000316512 456 ntBASIC6.1□□□□□ -1.43
LIG1P18858 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LIG1P18858 FRG1CP-201ENST00000358464 769 ntBASIC6.1□□□□□ -1.43
LIG1P18858 RN7SKP160-201ENST00000363804 340 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 RNU6-1151P-201ENST00000384684 107 ntBASIC6.1□□□□□ -1.43
LIG1P18858 MIR551A-201ENST00000385042 96 ntBASIC6.1□□□□□ -1.43
LIG1P18858 RNU1-77P-201ENST00000390868 162 ntBASIC6.1□□□□□ -1.43
LIG1P18858 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 RNU6-272P-201ENST00000411028 104 ntBASIC6.1□□□□□ -1.43
LIG1P18858 RNU6-195P-201ENST00000411352 109 ntBASIC6.1□□□□□ -1.43
LIG1P18858 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.1□□□□□ -1.43
LIG1P18858 Z93019.1-201ENST00000416450 973 ntBASIC6.1□□□□□ -1.43
LIG1P18858 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.1□□□□□ -1.43
LIG1P18858 RPS20P1-201ENST00000434853 354 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LIG1P18858 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.1□□□□□ -1.43
LIG1P18858 AL672138.1-201ENST00000450604 1015 ntBASIC6.1□□□□□ -1.43
LIG1P18858 NDUFA5P7-201ENST00000452914 242 ntBASIC6.1□□□□□ -1.43
LIG1P18858 RPL7AP52-201ENST00000458096 790 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AL133445.1-201ENST00000467051 452 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC092754.1-201ENST00000472975 479 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC017015.1-201ENST00000477387 286 ntBASIC6.1□□□□□ -1.43
LIG1P18858 MTND1P3-201ENST00000484956 952 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC058823.1-201ENST00000485315 474 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.1□□□□□ -1.43
LIG1P18858 AC025674.1-201ENST00000507074 324 ntBASIC6.1□□□□□ -1.43
LIG1P18858 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.1□□□□□ -1.43
LIG1P18858 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.1□□□□□ -1.43
LIG1P18858 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms