Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HMGA1P17096 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGA1P17096 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGA1P17096 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGA1P17096 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 HSPD1P16-201ENST00000402302 394 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AL512430.2-201ENST00000406786 339 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 SNORA79B-201ENST00000410557 148 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 BOLA3P4-201ENST00000418151 400 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AC013470.3-201ENST00000420252 1194 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AL645937.1-202ENST00000421799 937 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 DUTP6-201ENST00000425573 462 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 NPM1P24-201ENST00000428039 894 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AC105272.1-201ENST00000438604 198 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGA1P17096 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGA1P17096 AL162389.1-201ENST00000449233 177 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGA1P17096 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGA1P17096 HMGN2P7-201ENST00000456186 273 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AC010468.1-201ENST00000461022 817 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 NIPA2P2-201ENST00000496376 1083 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGA1P17096 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 AC024153.1-201ENST00000603103 365 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 AC006023.1-201ENST00000603944 259 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 AC093775.1-201ENST00000624154 1868 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 SAGE4P-201ENST00000442271 3381 ntBASIC3.04□□□□□ -1.92
HMGA1P17096 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGA1P17096 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGA1P17096 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGA1P17096 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGA1P17096 SNORA11.2-201ENST00000408318 127 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 U3.42-201ENST00000408746 214 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGA1P17096 USP9YP36-201ENST00000424581 829 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGA1P17096 USP9YP31-201ENST00000431405 881 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGA1P17096 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGA1P17096 RPS24P13-201ENST00000442520 397 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 MTND6P5-201ENST00000448266 512 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGA1P17096 HMGB1P3-201ENST00000502802 616 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 KCTD9P5-201ENST00000504141 1170 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 AC114967.1-201ENST00000504890 259 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGA1P17096 MTCYBP19-201ENST00000517463 1124 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGA1P17096 AC079600.2-201ENST00000550076 130 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGA1P17096 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.03□□□□□ -1.92
HMGA1P17096 AL590240.3-201ENST00000621416 943 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HMGA1P17096 AC119674.1-212ENST00000641155 993 ntBASIC3.03□□□□□ -1.92
HMGA1P17096 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGA1P17096 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGA1P17096 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGA1P17096 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGA1P17096 AP003122.5-201ENST00000527668 3766 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 ANKRD36P1-201ENST00000344424 659 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
HMGA1P17096 AC019155.1-201ENST00000382242 574 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 MIR3074-201ENST00000384885 81 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AL031121.1-201ENST00000406553 254 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AL583834.1-201ENST00000406943 343 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGA1P17096 RAB28P3-201ENST00000448325 597 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGA1P17096 AC111000.2-201ENST00000507775 550 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 RPL23AP94-201ENST00000512518 302 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGA1P17096 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGA1P17096 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGA1P17096 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGA1P17096 ATP1B3P1-201ENST00000605365 821 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 PLCE1P1-201ENST00000622094 305 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AC007998.5-201ENST00000622938 237 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGA1P17096 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGA1P17096 FAM35BP-202ENST00000497389 3337 ntBASIC3.02□□□□□ -1.93
HMGA1P17096 AL021368.2-201ENST00000606125 5352 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGA1P17096 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 UBE2V1P2-201ENST00000397758 440 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGA1P17096 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGA1P17096 AC112653.1-201ENST00000443851 386 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 AC107015.1-201ENST00000466902 747 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 RPS17P11-201ENST00000474297 293 ntBASIC3.01□□□□□ -1.93
HMGA1P17096 RN7SL633P-201ENST00000488974 297 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms