Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
COL11A1P12107 NR1H5P-201ENST00000452683 1377 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.4□□□□□ -1.87
COL11A1P12107 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
COL11A1P12107 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL11A1P12107 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.4□□□□□ -1.87
COL11A1P12107 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL11A1P12107 RNU6-859P-201ENST00000362728 107 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 U3.12-201ENST00000364498 214 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL11A1P12107 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL11A1P12107 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.4□□□□□ -1.87
COL11A1P12107 AC013410.1-201ENST00000436223 1232 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 AL109933.2-201ENST00000452651 260 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 AC118465.1-201ENST00000513820 1271 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 AP002404.1-201ENST00000532005 451 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 AL512310.1-201ENST00000548639 172 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 CYCSP39-201ENST00000565821 309 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.4□□□□□ -1.87
COL11A1P12107 AC103881.1-201ENST00000603476 538 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 OR2AS2P-201ENST00000606902 342 ntBASIC3.4□□□□□ -1.87
COL11A1P12107 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.39□□□□□ -1.87
COL11A1P12107 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.39□□□□□ -1.87
COL11A1P12107 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
COL11A1P12107 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL11A1P12107 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL11A1P12107 MIR449A-201ENST00000362113 91 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 MIR708-201ENST00000390708 88 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 AC110754.1-201ENST00000399740 601 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 RN7SKP222-201ENST00000410651 315 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 AC233982.1-201ENST00000451247 436 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 AC002553.2-201ENST00000453217 340 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.39□□□□□ -1.87
COL11A1P12107 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.39□□□□□ -1.87
COL11A1P12107 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.39□□□□□ -1.87
COL11A1P12107 AC245100.7-201ENST00000609678 442 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 AL359535.1-201ENST00000612100 1087 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 PLCE1P1-201ENST00000622094 305 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 AC017002.4-201ENST00000604721 1525 ntBASIC3.39□□□□□ -1.87
COL11A1P12107 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL11A1P12107 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.39□□□□□ -1.87
COL11A1P12107 GABRG2-229ENST00000641017 3628 ntBASIC3.38□□□□□ -1.87
COL11A1P12107 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL11A1P12107 FTLP6-201ENST00000355274 422 ntBASIC3.38□□□□□ -1.87
COL11A1P12107 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.38□□□□□ -1.87
COL11A1P12107 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.38□□□□□ -1.87
COL11A1P12107 AL445528.1-201ENST00000426330 420 ntBASIC3.38□□□□□ -1.87
COL11A1P12107 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.38□□□□□ -1.87
COL11A1P12107 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.38□□□□□ -1.87
COL11A1P12107 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.38□□□□□ -1.87
COL11A1P12107 LDHBP3-201ENST00000514909 822 ntBASIC3.38□□□□□ -1.87
COL11A1P12107 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.38□□□□□ -1.87
COL11A1P12107 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.38□□□□□ -1.87
COL11A1P12107 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
COL11A1P12107 AP003485.2-201ENST00000623636 610 ntBASIC3.38□□□□□ -1.87
COL11A1P12107 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
COL11A1P12107 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL11A1P12107 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.38□□□□□ -1.87
COL11A1P12107 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL11A1P12107 AC087499.2-201ENST00000432861 149 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 AP000936.3-201ENST00000438127 255 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 AL162389.1-201ENST00000449233 177 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
COL11A1P12107 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL11A1P12107 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
COL11A1P12107 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.37□□□□□ -1.87
COL11A1P12107 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.37□□□□□ -1.87
COL11A1P12107 RPL12P22-201ENST00000519073 490 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 AC109329.2-201ENST00000519658 482 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL11A1P12107 AC104984.5-201ENST00000586878 94 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.37□□□□□ -1.87
COL11A1P12107 AC124856.1-201ENST00000600819 896 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 AL356490.1-201ENST00000623079 479 ntBASIC3.37□□□□□ -1.87
COL11A1P12107 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL11A1P12107 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A1P12107 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A1P12107 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
COL11A1P12107 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
COL11A1P12107 AL359693.1-201ENST00000614959 2407 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL11A1P12107 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 RPL5P18-201ENST00000406671 891 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.36□□□□□ -1.87
COL11A1P12107 AC017007.3-201ENST00000479865 435 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 METTL15P1-201ENST00000481421 1045 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 AC021733.2-201ENST00000518830 497 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 AC104027.1-201ENST00000521887 300 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 AC007566.2-201ENST00000603642 413 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 AL450472.3-201ENST00000615578 367 ntBASIC3.36□□□□□ -1.87
COL11A1P12107 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.36□□□□□ -1.87
COL11A1P12107 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
COL11A1P12107 RNA5SP502-201ENST00000362694 119 ntBASIC3.35□□□□□ -1.87
COL11A1P12107 RPS7P13-201ENST00000413955 498 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms