Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC020914.6-201ENST00000594327 272 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 AC104785.1-201ENST00000603220 588 ntBASIC2.52□□□□□ -2.01
CXCL1P09341 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.52□□□□□ -2.01
CXCL1P09341 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CXCL1P09341 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL1P09341 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.52□□□□□ -2.01
CXCL1P09341 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.52□□□□□ -2.01
CXCL1P09341 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL1P09341 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL1P09341 AF117829.1-206ENST00000621883 3802 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL1P09341 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.51□□□□□ -2.01
CXCL1P09341 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.51□□□□□ -2.01
CXCL1P09341 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CXCL1P09341 SNORA51.2-201ENST00000364595 132 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 RNU1-13P-201ENST00000384499 162 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.51□□□□□ -2.01
CXCL1P09341 OR1AA1P-201ENST00000419597 916 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC241520.1-201ENST00000422654 1099 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL1P09341 RPL7P46-201ENST00000425129 740 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 BRWD1P3-201ENST00000428816 390 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.51□□□□□ -2.01
CXCL1P09341 SETP8-201ENST00000435341 628 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.51□□□□□ -2.01
CXCL1P09341 AL157827.1-201ENST00000447622 132 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.51□□□□□ -2.01
CXCL1P09341 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL1P09341 GSTA11P-201ENST00000452866 669 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 U3.44-201ENST00000458938 192 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 PLGLA-201ENST00000465668 449 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC012181.1-201ENST00000479895 423 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL1P09341 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL1P09341 AC093755.1-201ENST00000512950 1023 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 SNORA31.26-201ENST00000517250 137 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC104986.1-201ENST00000517978 436 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL1P09341 C1GALT1P3-201ENST00000522049 819 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.51□□□□□ -2.01
CXCL1P09341 AC010653.1-201ENST00000571108 881 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC090616.5-202ENST00000582111 297 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC005021.1-201ENST00000608730 355 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AC006023.2-201ENST00000609916 167 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 AL359198.2-201ENST00000611836 194 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 MLECP1-201ENST00000615893 709 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 MIR6864-201ENST00000617935 70 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 MIR6730-201ENST00000622213 67 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL1P09341 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.51□□□□□ -2.01
CXCL1P09341 FAM35BP-202ENST00000497389 3337 ntBASIC2.51□□□□□ -2.01
CXCL1P09341 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CXCL1P09341 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 ASNSP3-201ENST00000451989 1306 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 MTCO1P24-201ENST00000515438 1558 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CXCL1P09341 SPRR2C-201ENST00000290702 219 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AL121657.1-201ENST00000327215 531 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CXCL1P09341 MIR323B-201ENST00000385269 82 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 RPL32P23-201ENST00000397237 405 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 RPL7P60-201ENST00000397636 735 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 MTND4P13-201ENST00000402078 1023 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AL590103.1-201ENST00000434488 307 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 HMGN2P20-201ENST00000437531 273 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 MED6P1-201ENST00000439659 713 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 MTCYBP12-201ENST00000440559 1134 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 RPL23AP33-201ENST00000442301 452 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL1P09341 ARPC3P2-201ENST00000457786 533 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL1P09341 AC108120.2-201ENST00000512973 294 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 RNU6-1004P-201ENST00000516584 111 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 RN7SKP282-201ENST00000516824 299 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 TRMT10BP1-201ENST00000519377 943 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL1P09341 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL1P09341 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.5□□□□□ -2.01
CXCL1P09341 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL1P09341 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.5□□□□□ -2.01
CXCL1P09341 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL1P09341 MTCO3P13-201ENST00000577757 781 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.5□□□□□ -2.01
CXCL1P09341 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.5□□□□□ -2.01
CXCL1P09341 AC083760.1-201ENST00000589621 670 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AC008745.1-201ENST00000604064 271 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AC090912.3-201ENST00000609775 533 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AL354950.1-201ENST00000614150 568 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 MIR7641-1-201ENST00000627518 61 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms