Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOAP06340 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOAP06340 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOAP06340 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DOAP06340 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DOAP06340 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DOAP06340 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DOAP06340 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DOAP06340 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNU1-94P-201ENST00000362627 173 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNU1-14P-201ENST00000362759 152 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP151-201ENST00000365632 117 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AL583835.1-201ENST00000399570 407 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP317-201ENST00000410176 116 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP36-201ENST00000410197 133 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP311-201ENST00000411290 116 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 PIGPP2-201ENST00000411569 458 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AL157831.1-201ENST00000426134 473 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 MTCO1P54-201ENST00000430139 712 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 RPS25P9-201ENST00000435591 252 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 LARP1BP3-201ENST00000437229 869 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 UBE2V1P5-201ENST00000440070 405 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC092641.1-201ENST00000440229 772 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 EPS15P1-201ENST00000448836 336 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC027673.1-201ENST00000456245 405 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 MTND1P16-201ENST00000465177 898 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 GAPDHP39-201ENST00000481866 979 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC108022.1-201ENST00000493466 478 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 KCTD9P2-201ENST00000512203 1013 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 FABP5P5-201ENST00000515537 406 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RN7SKP46-201ENST00000515942 234 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP315-201ENST00000516340 116 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP519-201ENST00000516480 119 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 RNA5SP312-201ENST00000517068 116 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 DUXAP2-201ENST00000519198 589 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC087808.1-201ENST00000520501 361 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 OR6C7P-201ENST00000547875 934 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AL352979.3-201ENST00000553515 247 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 AL121834.1-201ENST00000572284 509 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 AC008507.1-201ENST00000587506 734 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 IMMP1LP1-201ENST00000605170 488 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 U6atac.1-201ENST00000616025 117 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DOAP06340 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.12□□□□□ -1.59
HLA-DOAP06340 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DOAP06340 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DOAP06340 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DOAP06340 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 RNU6-867P-201ENST00000364956 107 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DOAP06340 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DOAP06340 RN7SKP235-201ENST00000410662 305 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 EIF4A1P3-201ENST00000411521 244 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 MED14P1-201ENST00000430517 648 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 OR2B8P-201ENST00000432841 938 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 USP9YP22-201ENST00000438971 294 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DOAP06340 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 AC112206.1-201ENST00000468416 477 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HLA-DOAP06340 RPS27AP13-201ENST00000498403 237 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 MTATP6P22-201ENST00000507369 598 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 CDC42P4-201ENST00000510507 563 ntBASIC5.11□□□□□ -1.59
HLA-DOAP06340 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms