Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC002546.1-201ENST00000588041 2504 ntBASIC3.03□□□□□ -1.92
HMGN1P05114 AL645937.1-201ENST00000641739 1652 ntBASIC3.03□□□□□ -1.92
HMGN1P05114 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN1P05114 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN1P05114 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN1P05114 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGN1P05114 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.03□□□□□ -1.93
HMGN1P05114 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
HMGN1P05114 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 ELL2P4-201ENST00000446870 1376 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 AC092447.7-201ENST00000422212 1621 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 SNORD3H-201ENST00000384486 214 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 U8.11-201ENST00000384699 133 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 U8.12-201ENST00000384701 133 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 RPL21P75-201ENST00000396599 483 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 RPL21P28-201ENST00000401418 483 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AL592114.1-201ENST00000403842 483 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN1P05114 AL807761.1-201ENST00000417622 171 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 RPA2P2-201ENST00000419698 796 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AL031736.2-201ENST00000426573 787 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN1P05114 CYCSP4-201ENST00000429682 331 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN1P05114 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN1P05114 RPL17P49-201ENST00000443728 411 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN1P05114 AC073387.1-201ENST00000453261 709 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 OR6K1P-201ENST00000456766 971 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 U8.18-201ENST00000459285 133 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 RPL21P39-201ENST00000463605 483 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC011979.1-201ENST00000472300 483 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 RPL21P93-201ENST00000480465 489 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC233702.1-201ENST00000482905 502 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC087190.1-201ENST00000484462 480 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN1P05114 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 AC093591.1-201ENST00000491435 481 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 RPL21P129-201ENST00000491732 478 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 RPL21P16-201ENST00000495531 483 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 FCF1P8-201ENST00000510322 597 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 NPM1P41-201ENST00000512920 831 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN1P05114 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN1P05114 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HMGN1P05114 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN1P05114 SETP2-201ENST00000553886 926 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN1P05114 MIR4443-201ENST00000585052 53 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN1P05114 AL591516.1-201ENST00000611326 274 ntBASIC3.02□□□□□ -1.93
HMGN1P05114 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN1P05114 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN1P05114 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN1P05114 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN1P05114 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN1P05114 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGN1P05114 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN1P05114 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HMGN1P05114 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN1P05114 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN1P05114 EIF5P1-201ENST00000400019 1231 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 RN7SKP58-201ENST00000411010 305 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN1P05114 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN1P05114 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN1P05114 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN1P05114 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN1P05114 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HMGN1P05114 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 TPT1P12-201ENST00000448968 492 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 AC115115.1-201ENST00000449927 248 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 NECAP1P2-201ENST00000455668 727 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGN1P05114 HSPD1P15-201ENST00000505573 1122 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN1P05114 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN1P05114 AC245128.3-201ENST00000594721 748 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGN1P05114 AC099676.1-201ENST00000608886 657 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 AL391834.1-201ENST00000609609 560 ntBASIC3.01□□□□□ -1.93
HMGN1P05114 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
HMGN1P05114 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
HMGN1P05114 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
HMGN1P05114 AL136520.1-201ENST00000600311 1322 ntBASIC3□□□□□ -1.93
HMGN1P05114 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3□□□□□ -1.93
HMGN1P05114 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HMGN1P05114 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGN1P05114 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3□□□□□ -1.93
HMGN1P05114 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms