Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 OR2M1P-201ENST00000318104 951 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 MIR323A-201ENST00000362199 86 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 RN7SKP292-201ENST00000365522 317 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 U3.29-201ENST00000391296 212 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 MIR548K-201ENST00000408406 116 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 MIR548F5-201ENST00000408421 86 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 RNA5SP178-201ENST00000410380 128 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC245054.2-201ENST00000415639 319 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC007529.1-201ENST00000418574 2178 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC018630.2-202ENST00000422992 927 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC130360.1-201ENST00000425489 1117 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.78□□□□□ -1.48
PDGFAP04085 CEACAMP1-201ENST00000434624 1035 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.78□□□□□ -1.48
PDGFAP04085 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.78□□□□□ -1.48
PDGFAP04085 ACA64.1-201ENST00000459171 127 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC011476.1-201ENST00000466725 307 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 RNA5SP400-201ENST00000517155 111 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC130365.2-201ENST00000525882 1201 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 AP000763.2-201ENST00000540641 163 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 AL352979.3-201ENST00000553515 247 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AL118558.2-201ENST00000556294 238 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 MIR3942-201ENST00000585264 109 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFAP04085 AP001823.1-201ENST00000604056 1003 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AL451044.1-201ENST00000604867 238 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AC113194.1-201ENST00000606037 500 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC093388.1-201ENST00000609166 430 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFAP04085 AC011155.2-201ENST00000623202 216 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 AL078596.1-201ENST00000624856 447 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
PDGFAP04085 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDGFAP04085 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 AC062022.1-201ENST00000451026 1684 ntBASIC5.78□□□□□ -1.48
PDGFAP04085 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDGFAP04085 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFAP04085 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFAP04085 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFAP04085 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFAP04085 OR52B3P-201ENST00000314715 928 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 SNORA21-201ENST00000362423 132 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 Y_RNA.146-201ENST00000363549 102 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 SNORD113-7-201ENST00000363762 77 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 Y_RNA.378-201ENST00000365652 113 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 Y_RNA.395-201ENST00000383945 109 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PDGFAP04085 RNU4-14P-201ENST00000410858 122 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 RPL37P10-201ENST00000412884 288 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFAP04085 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFAP04085 Z93019.1-201ENST00000416450 973 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFAP04085 RPL34P3-201ENST00000421454 338 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 BX510359.3-201ENST00000422168 306 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.77□□□□□ -1.49
PDGFAP04085 AC092162.1-201ENST00000432828 434 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 RPL35AP22-201ENST00000436855 335 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFAP04085 HMGB3P11-201ENST00000440127 604 ntBASIC5.77□□□□□ -1.49
PDGFAP04085 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms