Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORD15B-201ENST00000384714 146 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 RN7SKP247-201ENST00000411094 308 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.67□□□□□ -1.82
COL1A1P02452 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.67□□□□□ -1.82
COL1A1P02452 RPL7L1P1-201ENST00000448259 785 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AL136097.1-201ENST00000456945 913 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 RN7SL20P-201ENST00000488827 297 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 OR9N1P-201ENST00000491296 333 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.67□□□□□ -1.82
COL1A1P02452 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.67□□□□□ -1.82
COL1A1P02452 AC103881.1-201ENST00000603476 538 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AL049844.2-201ENST00000604280 628 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AC132825.8-201ENST00000640783 297 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.67□□□□□ -1.82
COL1A1P02452 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.67□□□□□ -1.82
COL1A1P02452 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL1A1P02452 RPL7P26-201ENST00000333817 754 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.67□□□□□ -1.82
COL1A1P02452 SSR1P1-201ENST00000407630 814 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.67□□□□□ -1.82
COL1A1P02452 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.67□□□□□ -1.82
COL1A1P02452 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.67□□□□□ -1.82
COL1A1P02452 RPL7P59-201ENST00000447700 943 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.67□□□□□ -1.82
COL1A1P02452 RPS4XP22-201ENST00000480755 780 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AC083906.5-201ENST00000503722 328 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 RNU6-237P-201ENST00000515985 71 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 ELOCP29-201ENST00000588193 334 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AL390838.2-201ENST00000602394 274 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 AC139713.2-210ENST00000641741 992 ntBASIC3.67□□□□□ -1.82
COL1A1P02452 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.66□□□□□ -1.82
COL1A1P02452 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
COL1A1P02452 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL1A1P02452 AC093909.5-201ENST00000621839 1799 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 AL606537.1-201ENST00000607258 2011 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
COL1A1P02452 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL1A1P02452 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL1A1P02452 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
COL1A1P02452 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL1A1P02452 MTND5P24-201ENST00000438892 1767 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 SKINT1L-201ENST00000401057 817 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 NUP35P1-201ENST00000422734 947 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 DUTP6-201ENST00000425573 462 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 RPS24P13-201ENST00000442520 397 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 AC010306.1-201ENST00000523223 1117 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL1A1P02452 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.66□□□□□ -1.82
COL1A1P02452 AC092851.1-201ENST00000535964 478 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 AC245100.7-201ENST00000609678 442 ntBASIC3.66□□□□□ -1.82
COL1A1P02452 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL1A1P02452 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL1A1P02452 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL1A1P02452 RNA5SP502-201ENST00000362694 119 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 SNORA18.3-201ENST00000384122 132 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 RNA5SP184-201ENST00000411071 108 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.65□□□□□ -1.83
COL1A1P02452 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.65□□□□□ -1.83
COL1A1P02452 BX276092.4-201ENST00000452056 248 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.65□□□□□ -1.83
COL1A1P02452 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.65□□□□□ -1.83
COL1A1P02452 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.65□□□□□ -1.83
COL1A1P02452 RPS27AP18-201ENST00000515536 459 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 RNA5SP367-201ENST00000516557 118 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.65□□□□□ -1.83
COL1A1P02452 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.65□□□□□ -1.83
COL1A1P02452 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.65□□□□□ -1.83
COL1A1P02452 MIR4319-201ENST00000577285 85 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 ATP1B3P1-201ENST00000605365 821 ntBASIC3.65□□□□□ -1.83
COL1A1P02452 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.65□□□□□ -1.83
COL1A1P02452 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL1A1P02452 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL1A1P02452 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL1A1P02452 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
COL1A1P02452 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL1A1P02452 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL1A1P02452 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL1A1P02452 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL1A1P02452 AC110754.1-201ENST00000399740 601 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 MIR1261-201ENST00000408659 82 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 AL645937.1-202ENST00000421799 937 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 RPL31P12-201ENST00000422587 358 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.64□□□□□ -1.83
COL1A1P02452 RN7SKP272-201ENST00000516988 232 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 AC021733.2-201ENST00000518830 497 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.64□□□□□ -1.83
COL1A1P02452 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.64□□□□□ -1.83
COL1A1P02452 AC007318.2-201ENST00000620999 243 ntBASIC3.64□□□□□ -1.83
COL1A1P02452 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.64□□□□□ -1.83
COL1A1P02452 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
COL1A1P02452 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.64□□□□□ -1.83
COL1A1P02452 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL1A1P02452 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms