Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC068880.4-201ENST00000623082 495 ntBASIC2.78□□□□□ -1.96
HLA-DQA1P01909 AC006065.5-201ENST00000623427 349 ntBASIC2.78□□□□□ -1.96
HLA-DQA1P01909 U6.98-201ENST00000637157 84 ntBASIC2.78□□□□□ -1.96
HLA-DQA1P01909 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 AC000367.1-201ENST00000452711 1766 ntBASIC2.78□□□□□ -1.96
HLA-DQA1P01909 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 AC073055.1-201ENST00000456901 1621 ntBASIC2.78□□□□□ -1.96
HLA-DQA1P01909 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DQA1P01909 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HLA-DQA1P01909 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 SNORA63.3-201ENST00000362682 132 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RNU6-1243P-201ENST00000364028 107 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 U6.112-201ENST00000384129 70 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RNU6-1151P-201ENST00000384684 107 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 OR6C69P-201ENST00000394268 893 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 HSPE1P12-201ENST00000412576 301 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL592293.2-201ENST00000422292 996 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 BX890604.2-201ENST00000427883 474 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 C4BPAP2-201ENST00000428434 478 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 OR51AB1P-201ENST00000429046 620 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC016712.1-201ENST00000431088 378 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC010881.1-201ENST00000433830 235 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 FTH1P1-201ENST00000437933 532 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AP000949.1-201ENST00000438328 629 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 OR51B8P-201ENST00000449892 769 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 TVP23BP2-201ENST00000455082 615 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 CDC42P1-201ENST00000456658 548 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RNU7-140P-201ENST00000459546 60 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC041039.1-201ENST00000485656 536 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC092185.1-201ENST00000491371 97 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RN7SL604P-201ENST00000492589 296 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC012170.1-201ENST00000495139 359 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 UBE2CP3-201ENST00000502715 450 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 KCTD9P5-201ENST00000504141 1170 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC099522.1-202ENST00000514718 367 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RNA5SP208-201ENST00000516156 78 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RNA5SP380-201ENST00000517190 98 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 SOD1P3-201ENST00000518682 454 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC068657.1-201ENST00000520807 306 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC124293.1-201ENST00000530034 493 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL121766.1-201ENST00000547436 487 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC006960.3-201ENST00000561845 705 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL845331.3-202ENST00000562856 261 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC009948.4-201ENST00000604692 675 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC013468.1-201ENST00000608680 598 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 MLECP1-201ENST00000615893 709 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC078880.5-201ENST00000617845 421 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 MIR6758-201ENST00000620653 63 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AL590396.4-201ENST00000636779 956 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HLA-DQA1P01909 AC007496.3-201ENST00000624987 3443 ntBASIC2.77□□□□□ -1.97
HLA-DQA1P01909 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 GABPAP-201ENST00000419271 1356 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 LARP1BP1-201ENST00000506036 1359 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC092326.2-201ENST00000624772 1561 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms