Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.625-201ENST00000411256 107 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC068287.1-201ENST00000430283 295 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 RPL21P110-201ENST00000433345 446 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 CEACAMP1-201ENST00000434624 1035 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 OR6K5P-201ENST00000447050 945 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 MTCO3P20-201ENST00000454926 688 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 MTND2P28-201ENST00000457540 1044 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 CEACAMP4-201ENST00000457676 421 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 snoU13.1-201ENST00000459157 104 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC011979.1-201ENST00000472300 483 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 GAPDHP39-201ENST00000481866 979 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 RPL5P23-201ENST00000496040 868 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC010486.2-201ENST00000505572 483 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.91□□□□□ -1.78
CLPTM1O96005 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC118282.2-201ENST00000508739 374 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.91□□□□□ -1.78
CLPTM1O96005 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.91□□□□□ -1.78
CLPTM1O96005 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC007834.2-201ENST00000536310 343 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC012321.1-201ENST00000561622 1588 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC007599.1-201ENST00000568688 1174 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AL354943.1-201ENST00000572103 781 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 MIR4666A-201ENST00000580160 79 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC090312.2-201ENST00000582687 378 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 RPL12P25-202ENST00000598100 674 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 NTAN1P1-201ENST00000603150 646 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC080013.3-201ENST00000606839 578 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC093783.1-201ENST00000612976 329 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AL133243.1-201ENST00000614487 366 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC018926.3-201ENST00000618841 406 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AC016717.3-201ENST00000624730 554 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 AC116563.2-201ENST00000624751 535 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL773545.4-201ENST00000637262 310 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL513478.4-201ENST00000641636 310 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 AL592148.3-201ENST00000608771 2646 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.9□□□□□ -1.78
CLPTM1O96005 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLPTM1O96005 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLPTM1O96005 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CLPTM1O96005 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.9□□□□□ -1.78
CLPTM1O96005 AC104454.1-201ENST00000421341 1401 ntBASIC3.9□□□□□ -1.78
CLPTM1O96005 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.9□□□□□ -1.78
CLPTM1O96005 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLPTM1O96005 ERCC6-202ENST00000374127 1782 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLPTM1O96005 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLPTM1O96005 MIR16-1-201ENST00000385271 89 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 SDHCP2-201ENST00000398565 501 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 AL049545.1-201ENST00000401856 572 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 RPS4XP9-201ENST00000405151 780 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.9□□□□□ -1.79
CLPTM1O96005 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.9□□□□□ -1.79
CLPTM1O96005 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.9□□□□□ -1.79
CLPTM1O96005 RPL7AP25-201ENST00000423357 805 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.9□□□□□ -1.79
CLPTM1O96005 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.9□□□□□ -1.79
CLPTM1O96005 MTND5P25-201ENST00000430499 799 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.9□□□□□ -1.79
CLPTM1O96005 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.9□□□□□ -1.79
CLPTM1O96005 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.9□□□□□ -1.79
CLPTM1O96005 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 RPL23AP76-201ENST00000441860 458 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.9□□□□□ -1.79
CLPTM1O96005 AL162591.2-201ENST00000449634 317 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 TPT1P13-201ENST00000449760 499 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 MTCO3P16-201ENST00000454456 754 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 RPS27AP17-201ENST00000463344 455 ntBASIC3.9□□□□□ -1.79
CLPTM1O96005 AC015724.1-201ENST00000478577 156 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms