Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC037471.2-201ENST00000564941 598 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC119674.1-207ENST00000641355 633 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AL353743.4-201ENST00000422653 1547 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC058791.1-201ENST00000608412 3198 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC007823.1-201ENST00000569932 1566 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.37□□□□□ -1.87
SEMA3DO95025 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 OR5T3-201ENST00000303059 1023 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 SNORD3H-201ENST00000384486 214 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 RNU6ATAC-201ENST00000408749 126 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 RPS7P13-201ENST00000413955 498 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.36□□□□□ -1.87
SEMA3DO95025 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.36□□□□□ -1.87
SEMA3DO95025 EIF2S2P3-201ENST00000428356 999 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL445584.1-201ENST00000431451 330 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL035246.1-201ENST00000433554 1255 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC007389.2-201ENST00000434630 306 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 MED6P1-201ENST00000439659 713 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 RPS15AP29-201ENST00000445539 400 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.36□□□□□ -1.87
SEMA3DO95025 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.36□□□□□ -1.87
SEMA3DO95025 MTND2P8-201ENST00000450555 1025 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 RPL7P15-201ENST00000461190 712 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 FCF1P3-201ENST00000496394 590 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.36□□□□□ -1.87
SEMA3DO95025 RNU4-60P-201ENST00000517239 135 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC115085.1-201ENST00000588924 229 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC006116.10-201ENST00000591836 581 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 ZNF92P3-201ENST00000596594 954 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 AC112230.1-201ENST00000604342 547 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 SUMO2P14-201ENST00000604488 293 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC011816.2-201ENST00000607089 556 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC015802.5-201ENST00000607478 399 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC020658.4-201ENST00000613987 684 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC110801.1-201ENST00000623590 212 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC112200.1-201ENST00000625015 234 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
SEMA3DO95025 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEMA3DO95025 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
SEMA3DO95025 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 AC093010.3-201ENST00000570269 15214 ntBASIC3.36□□□□□ -1.87
SEMA3DO95025 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEMA3DO95025 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEMA3DO95025 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEMA3DO95025 RNU4-74P-201ENST00000411280 161 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 RPS20P25-201ENST00000412447 352 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 EI24P1-201ENST00000416584 867 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.35□□□□□ -1.87
SEMA3DO95025 AL158071.1-201ENST00000430315 461 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 RPL21P112-201ENST00000434403 463 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 HMGN2P20-201ENST00000437531 273 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.35□□□□□ -1.87
SEMA3DO95025 CYCSP20-201ENST00000473154 315 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AC005726.1-201ENST00000494679 427 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AC021146.5-201ENST00000503544 545 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.35□□□□□ -1.87
SEMA3DO95025 SNORA70.19-201ENST00000516717 90 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.35□□□□□ -1.87
SEMA3DO95025 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.35□□□□□ -1.87
SEMA3DO95025 AC010198.2-201ENST00000550612 259 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 OR4T1P-201ENST00000554933 911 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.35□□□□□ -1.87
SEMA3DO95025 AC005242.1-201ENST00000585658 438 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.35□□□□□ -1.87
SEMA3DO95025 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEMA3DO95025 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AL365400.2-201ENST00000605604 902 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AC110792.4-201ENST00000609843 298 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 AC090337.1-201ENST00000579651 2074 ntBASIC3.35□□□□□ -1.87
SEMA3DO95025 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEMA3DO95025 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SEMA3DO95025 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.87
SEMA3DO95025 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms