Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS4BO75351 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 NPM1P6-201ENST00000521088 871 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4BO75351 CYCSP28-201ENST00000534284 321 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS4BO75351 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
VPS4BO75351 ATP5J2P6-201ENST00000565203 266 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC091489.2-201ENST00000566263 604 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC083760.1-201ENST00000589621 670 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 AC243773.3-201ENST00000613270 256 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS4BO75351 AC231657.1-201ENST00000624313 397 ntBASIC4.77□□□□□ -1.65
VPS4BO75351 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS4BO75351 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS4BO75351 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS4BO75351 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS4BO75351 AC000123.3-201ENST00000624029 4975 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AL031985.3-201ENST00000565390 2449 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 AC117529.2-201ENST00000512159 2068 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 SNORA70.2-201ENST00000364506 135 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 RNU6-921P-201ENST00000384361 107 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS4BO75351 Z97832.1-201ENST00000402490 328 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 HMGB1P17-201ENST00000403495 628 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 AC092647.1-201ENST00000420654 287 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AL389915.1-201ENST00000422463 466 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 MTND1P4-201ENST00000435196 415 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AC092427.1-201ENST00000439177 601 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AL357520.1-201ENST00000441557 453 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4BO75351 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4BO75351 IGHV5-78-201ENST00000450948 295 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC091564.1-201ENST00000464563 479 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 RPS23P7-201ENST00000466210 444 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 RPL23AP72-201ENST00000492447 435 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 IRF5P1-201ENST00000504852 2164 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 DUXAP2-201ENST00000519198 589 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC021006.3-201ENST00000530771 192 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 AP006289.1-201ENST00000538089 277 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS4BO75351 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC009117.1-201ENST00000563948 554 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AC093536.2-201ENST00000565257 1406 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.76□□□□□ -1.65
VPS4BO75351 TVP23CP2-201ENST00000571473 623 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 MTATP6P3-201ENST00000581686 676 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC092794.1-201ENST00000612734 582 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC019206.1-201ENST00000621938 425 ntBASIC4.76□□□□□ -1.65
VPS4BO75351 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS4BO75351 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS4BO75351 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS4BO75351 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.75□□□□□ -1.65
VPS4BO75351 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 SALL4P2-201ENST00000423288 2910 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4BO75351 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS4BO75351 Y_RNA.6-201ENST00000362350 114 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 Y_RNA.41-201ENST00000362646 102 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 SNORA66-201ENST00000384792 133 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 RNU2-66P-201ENST00000410650 161 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 ATG4AP1-201ENST00000416893 538 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms