Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SNX3O60493 AC074029.4-201ENST00000624796 1859 ntBASIC3.85□□□□□ -1.79
SNX3O60493 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 OR56B2P-202ENST00000641377 2453 ntBASIC3.84□□□□□ -1.79
SNX3O60493 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 AL592148.3-201ENST00000608771 2646 ntBASIC3.84□□□□□ -1.79
SNX3O60493 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SNX3O60493 OR4A15-201ENST00000314706 1035 ntBASIC3.84□□□□□ -1.79
SNX3O60493 SNORD116.1-201ENST00000365628 92 ntBASIC3.84□□□□□ -1.79
SNX3O60493 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SNX3O60493 SUGT1P1-201ENST00000379514 476 ntBASIC3.84□□□□□ -1.79
SNX3O60493 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 RNU6-1226P-201ENST00000384317 107 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AL590704.1-201ENST00000402856 794 ntBASIC3.84□□□□□ -1.79
SNX3O60493 RPL23AP47-201ENST00000408017 460 ntBASIC3.84□□□□□ -1.79
SNX3O60493 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AL161449.1-201ENST00000414531 1199 ntBASIC3.84□□□□□ -1.79
SNX3O60493 LUZP4P1-201ENST00000415420 344 ntBASIC3.84□□□□□ -1.79
SNX3O60493 KRR1P1-201ENST00000419430 803 ntBASIC3.84□□□□□ -1.79
SNX3O60493 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC241584.1-201ENST00000438469 1241 ntBASIC3.84□□□□□ -1.79
SNX3O60493 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX3O60493 Z77249.1-201ENST00000444622 1175 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.84□□□□□ -1.79
SNX3O60493 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX3O60493 AC011979.1-201ENST00000472300 483 ntBASIC3.84□□□□□ -1.79
SNX3O60493 GAPDHP36-201ENST00000480688 918 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX3O60493 MTCYBP16-201ENST00000509187 1129 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 OR7H2P-201ENST00000513483 306 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX3O60493 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 GTF2IP8-201ENST00000560687 584 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AP001269.3-201ENST00000588718 329 ntBASIC3.84□□□□□ -1.79
SNX3O60493 GAS5-AS1-201ENST00000602767 694 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX3O60493 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX3O60493 AC099669.2-201ENST00000616549 437 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC068870.2-201ENST00000620635 389 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC026634.1-201ENST00000634369 198 ntBASIC3.84□□□□□ -1.79
SNX3O60493 AC090897.3-201ENST00000636973 1157 ntBASIC3.84□□□□□ -1.79
SNX3O60493 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 AC109780.1-201ENST00000451768 1344 ntBASIC3.84□□□□□ -1.79
SNX3O60493 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX3O60493 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX3O60493 RIOK3P1-201ENST00000418778 1528 ntBASIC3.84□□□□□ -1.8
SNX3O60493 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX3O60493 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SNX3O60493 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX3O60493 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX3O60493 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 AC011978.2-201ENST00000569835 2054 ntBASIC3.83□□□□□ -1.8
SNX3O60493 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX3O60493 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNX3O60493 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX3O60493 RNU4-92P-201ENST00000363783 136 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RNA5SP399-201ENST00000364003 117 ntBASIC3.83□□□□□ -1.8
SNX3O60493 MIR649-201ENST00000384843 97 ntBASIC3.83□□□□□ -1.8
SNX3O60493 MTND4P22-201ENST00000413116 1169 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC009237.5-201ENST00000414271 501 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RPS12P23-201ENST00000419579 400 ntBASIC3.83□□□□□ -1.8
SNX3O60493 MTND2P16-201ENST00000419987 799 ntBASIC3.83□□□□□ -1.8
SNX3O60493 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX3O60493 MRPS36P1-201ENST00000421291 307 ntBASIC3.83□□□□□ -1.8
SNX3O60493 MTCO3P1-205ENST00000422088 832 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RPEP3-201ENST00000425462 676 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC096632.1-201ENST00000427395 310 ntBASIC3.83□□□□□ -1.8
SNX3O60493 HIGD1AP4-201ENST00000430194 280 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX3O60493 AC011998.1-201ENST00000433403 117 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RPL12P3-201ENST00000440080 396 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RPL23AP76-201ENST00000441860 458 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RPS4XP4-201ENST00000443195 763 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC007327.1-201ENST00000447461 264 ntBASIC3.83□□□□□ -1.8
SNX3O60493 MRPS31P2-201ENST00000451581 518 ntBASIC3.83□□□□□ -1.8
SNX3O60493 RFC5P1-201ENST00000454419 874 ntBASIC3.83□□□□□ -1.8
SNX3O60493 PNPLA4P1-201ENST00000458328 305 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC084198.1-201ENST00000477747 402 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC108734.3-201ENST00000481241 1165 ntBASIC3.83□□□□□ -1.8
SNX3O60493 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX3O60493 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX3O60493 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX3O60493 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX3O60493 AC008958.1-201ENST00000511047 682 ntBASIC3.83□□□□□ -1.8
SNX3O60493 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms