Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.89
CEP290O15078 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.21□□□□□ -1.89
CEP290O15078 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
CEP290O15078 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CEP290O15078 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CEP290O15078 DUTP6-201ENST00000425573 462 ntBASIC3.21□□□□□ -1.9
CEP290O15078 NIPA2P5-201ENST00000452282 464 ntBASIC3.21□□□□□ -1.9
CEP290O15078 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.21□□□□□ -1.9
CEP290O15078 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CEP290O15078 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CEP290O15078 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CEP290O15078 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.21□□□□□ -1.9
CEP290O15078 RNA5SP21-201ENST00000410917 96 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.2□□□□□ -1.9
CEP290O15078 USP9YP2-201ENST00000504503 1000 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.2□□□□□ -1.9
CEP290O15078 USP9YP1-201ENST00000513521 1002 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AC015871.2-201ENST00000603605 948 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AC006840.1-201ENST00000623069 542 ntBASIC3.2□□□□□ -1.9
CEP290O15078 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CEP290O15078 AC105074.1-201ENST00000623380 3095 ntBASIC3.2□□□□□ -1.9
CEP290O15078 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CEP290O15078 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CEP290O15078 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
CEP290O15078 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
CEP290O15078 RPS3AP26-201ENST00000398259 784 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AL139039.1-201ENST00000401900 692 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AL136116.1-201ENST00000403591 381 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AL137014.1-201ENST00000420490 1226 ntBASIC3.2□□□□□ -1.9
CEP290O15078 MTCO3P16-201ENST00000454456 754 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AC010468.1-201ENST00000461022 817 ntBASIC3.2□□□□□ -1.9
CEP290O15078 RPL9P32-201ENST00000464118 620 ntBASIC3.2□□□□□ -1.9
CEP290O15078 RN7SL499P-201ENST00000481141 276 ntBASIC3.2□□□□□ -1.9
CEP290O15078 AC005351.1-201ENST00000511152 786 ntBASIC3.2□□□□□ -1.9
CEP290O15078 RNU6-548P-201ENST00000517083 115 ntBASIC3.2□□□□□ -1.9
CEP290O15078 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.2□□□□□ -1.9
CEP290O15078 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CEP290O15078 AL158062.1-201ENST00000619632 745 ntBASIC3.2□□□□□ -1.9
CEP290O15078 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CEP290O15078 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CEP290O15078 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
CEP290O15078 Y_RNA.164-201ENST00000363709 102 ntBASIC3.19□□□□□ -1.9
CEP290O15078 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CEP290O15078 AL009174.1-201ENST00000426577 416 ntBASIC3.19□□□□□ -1.9
CEP290O15078 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.19□□□□□ -1.9
CEP290O15078 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
CEP290O15078 AC117522.3-201ENST00000507974 584 ntBASIC3.19□□□□□ -1.9
CEP290O15078 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.19□□□□□ -1.9
CEP290O15078 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
CEP290O15078 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CEP290O15078 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CEP290O15078 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CEP290O15078 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CEP290O15078 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CEP290O15078 RNU6-283P-201ENST00000364788 107 ntBASIC3.19□□□□□ -1.9
CEP290O15078 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.19□□□□□ -1.9
CEP290O15078 MRPL50P2-201ENST00000416821 482 ntBASIC3.19□□□□□ -1.9
CEP290O15078 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.19□□□□□ -1.9
CEP290O15078 IFNNP1-201ENST00000429219 553 ntBASIC3.19□□□□□ -1.9
CEP290O15078 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.19□□□□□ -1.9
CEP290O15078 METTL15P1-201ENST00000481421 1045 ntBASIC3.19□□□□□ -1.9
CEP290O15078 AC012123.2-201ENST00000485809 248 ntBASIC3.19□□□□□ -1.9
CEP290O15078 AC015917.1-201ENST00000579654 510 ntBASIC3.19□□□□□ -1.9
CEP290O15078 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CEP290O15078 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CEP290O15078 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.18□□□□□ -1.9
CEP290O15078 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CEP290O15078 AL590290.1-201ENST00000405336 380 ntBASIC3.18□□□□□ -1.9
CEP290O15078 RNU4-53P-201ENST00000410828 140 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AL353705.4-201ENST00000449661 238 ntBASIC3.18□□□□□ -1.9
CEP290O15078 RNA5SP148-201ENST00000516527 94 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.18□□□□□ -1.9
CEP290O15078 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CEP290O15078 AC096947.1-201ENST00000603233 470 ntBASIC3.18□□□□□ -1.9
CEP290O15078 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.18□□□□□ -1.9
CEP290O15078 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CEP290O15078 AC003985.2-201ENST00000562268 1669 ntBASIC3.18□□□□□ -1.9
CEP290O15078 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CEP290O15078 RNVU1-3-201ENST00000364313 161 ntBASIC3.18□□□□□ -1.9
CEP290O15078 Y_RNA.269-201ENST00000364685 89 ntBASIC3.18□□□□□ -1.9
CEP290O15078 RPL23AP36-201ENST00000413895 458 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.18□□□□□ -1.9
CEP290O15078 FAM103A2P-201ENST00000444122 354 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.18□□□□□ -1.9
CEP290O15078 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CEP290O15078 AC112184.1-201ENST00000505179 312 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.18□□□□□ -1.9
CEP290O15078 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.18□□□□□ -1.9
CEP290O15078 AC009852.2-201ENST00000567898 485 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AC007566.2-201ENST00000603642 413 ntBASIC3.18□□□□□ -1.9
CEP290O15078 AC007938.3-201ENST00000604965 623 ntBASIC3.18□□□□□ -1.9
CEP290O15078 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CEP290O15078 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CEP290O15078 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CEP290O15078 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
CEP290O15078 AL662791.1-201ENST00000441992 928 ntBASIC3.17□□□□□ -1.9
CEP290O15078 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
CEP290O15078 HMGB3P14-201ENST00000494195 599 ntBASIC3.17□□□□□ -1.9
CEP290O15078 RNA5SP445-201ENST00000515889 115 ntBASIC3.17□□□□□ -1.9
CEP290O15078 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms