Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 CCNG2P1-201ENST00000549521 1000 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 YWHAZP1-201ENST00000556286 722 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC090877.1-201ENST00000561418 344 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC011458.1-201ENST00000604034 617 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL158050.2-201ENST00000605336 568 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU1-30P-201ENST00000606575 163 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC018754.1-201ENST00000607486 925 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC097504.2-201ENST00000608088 454 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC019176.2-201ENST00000611579 315 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC104763.3-201ENST00000613765 618 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC084757.4-201ENST00000616350 526 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL359715.5-201ENST00000623431 443 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC017104.5-201ENST00000637647 639 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AC119674.1-207ENST00000641355 633 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL627171.1-201ENST00000618845 1308 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 AL049737.1-201ENST00000413920 1403 ntBASIC3.84□□□□□ -1.79
NEDD8-MDP1E9PL57 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NEDD8-MDP1E9PL57 AC073055.1-201ENST00000456901 1621 ntBASIC3.84□□□□□ -1.8
NEDD8-MDP1E9PL57 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.84□□□□□ -1.8
NEDD8-MDP1E9PL57 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.8
NEDD8-MDP1E9PL57 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 SNORA70.4-201ENST00000365509 134 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 PTP4A1P7-201ENST00000423476 514 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC087650.1-201ENST00000431445 468 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 HMGB3P22-202ENST00000451823 572 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC104689.1-201ENST00000473356 768 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC084198.1-201ENST00000477747 402 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC073522.1-201ENST00000483312 377 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 SOD1P3-201ENST00000518682 454 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 PCNAP1-202ENST00000595299 752 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AL137849.1-201ENST00000604767 169 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 U3.45-201ENST00000607547 219 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC092608.3-201ENST00000625017 386 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 MTCO1P6-201ENST00000481192 1384 ntBASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD8-MDP1E9PL57 AL118496.1-201ENST00000440201 1812 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC007685.1-201ENST00000329806 452 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 MIR208A-201ENST00000362287 71 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-298P-201ENST00000390888 96 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 MCTS2P-201ENST00000394552 546 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 ATP5F1P4-201ENST00000397288 746 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 ZNF603P-201ENST00000405613 487 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-77P-201ENST00000410554 91 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 ATP5A1P2-201ENST00000412323 255 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AMD1P2-201ENST00000412936 992 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 RPL7P4-203ENST00000430239 730 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 UBE2V1P5-201ENST00000440070 405 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 MTND1P33-201ENST00000446251 917 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC106707.2-201ENST00000484182 374 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 RNU6-416P-201ENST00000516265 103 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC008802.1-201ENST00000519121 791 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 SMARCE1P4-201ENST00000523647 241 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC118942.1-201ENST00000529674 1035 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 AC124293.1-201ENST00000530034 493 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 CBX3P5-201ENST00000552017 521 ntBASIC3.82□□□□□ -1.8
NEDD8-MDP1E9PL57 OR4U1P-201ENST00000554958 912 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms