Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 RNU6-543P-201ENST00000362576 108 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 SNORA9-201ENST00000384215 133 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AL606495.1-201ENST00000422100 813 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 RPF2P1-201ENST00000424137 906 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AL031663.1-201ENST00000437445 219 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AL049829.1-201ENST00000465411 156 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 CYCSP20-201ENST00000473154 315 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC104687.1-201ENST00000485829 412 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 MTND1P36-201ENST00000522384 936 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 MTND4LP25-201ENST00000570218 163 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC017100.2-201ENST00000584628 355 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 VN1R84P-201ENST00000593697 235 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 OR2BH1P-201ENST00000608850 864 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AL442067.2-201ENST00000614033 363 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 U6.48-201ENST00000618523 106 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC244205.2-202ENST00000635781 342 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 U6.107-201ENST00000637108 79 ntBASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMIM28A0A1B0GU29 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RNA5SP197-201ENST00000363357 119 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RNU6-609P-201ENST00000365459 107 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 HMGB3P31-201ENST00000413333 595 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 UBE2V1P6-201ENST00000430840 422 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RPS3AP12-201ENST00000443616 753 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 TPTE2P6-202ENST00000445572 1007 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 BTF3P5-201ENST00000457252 467 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AL133477.1-201ENST00000457472 514 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 MTCO2P9-201ENST00000503214 694 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 MIR5195-201ENST00000583555 115 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RMST_10.1-201ENST00000616309 154 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AL158196.1-201ENST00000616786 434 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AP003072.4-201ENST00000624580 310 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 AC008432.1-201ENST00000615912 1320 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 MFSD8-213ENST00000641134 1327 ntBASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.66□□□□□ -1.82
SMIM28A0A1B0GU29 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SMIM28A0A1B0GU29 AL353743.4-201ENST00000422653 1547 ntBASIC3.65□□□□□ -1.82
SMIM28A0A1B0GU29 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMIM28A0A1B0GU29 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SMIM28A0A1B0GU29 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SMIM28A0A1B0GU29 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SMIM28A0A1B0GU29 MIR16-2-201ENST00000362117 81 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms