Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 AC123767.1-202ENST00000620407 817 ntBASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 AC112200.1-201ENST00000625015 234 ntBASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 AC104446.1-201ENST00000613728 1321 ntBASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1G3Q9Y6M4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RNU6-1339P-201ENST00000363574 91 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 SNORD35B-201ENST00000363660 87 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RNU1-89P-201ENST00000384592 164 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RNU6-906P-201ENST00000384700 70 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RN7SKP56-201ENST00000410513 331 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AL159169.1-201ENST00000421119 127 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 TBCAP1-201ENST00000436520 327 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 ELOCP11-201ENST00000436690 332 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 TPTE2P3-201ENST00000441562 1189 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 ELOCP16-201ENST00000444494 332 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RPS11P1-201ENST00000451072 473 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AP000926.1-201ENST00000479573 241 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC104108.1-201ENST00000509930 412 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 HMGB1P1-201ENST00000522557 636 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 OR8K4P-201ENST00000534608 872 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 MIR432-201ENST00000606207 94 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 VN1R7P-201ENST00000619242 903 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC006386.1-201ENST00000619436 415 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AC012442.3-202ENST00000636742 206 ntBASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1G3Q9Y6M4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.9□□□□□ -1.78
CSNK1G3Q9Y6M4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.78
CSNK1G3Q9Y6M4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CSNK1G3Q9Y6M4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CSNK1G3Q9Y6M4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 ANKRD36P1-201ENST00000344424 659 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 RNA5SP97-201ENST00000365006 84 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 Y_RNA.472-201ENST00000384322 102 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 Y_RNA.578-201ENST00000390903 88 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 MTCO1P56-201ENST00000401674 224 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 RNU4-22P-201ENST00000411058 166 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AL365396.1-201ENST00000430854 671 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 RPS24P8-201ENST00000431490 402 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 USP9YP24-201ENST00000434374 697 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AL592437.1-201ENST00000443781 492 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 USP9YP17-201ENST00000444617 696 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 TPTE2P6-202ENST00000445572 1007 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC092155.2-201ENST00000454675 477 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 MTND6P6-201ENST00000478031 263 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 RPL21P131-201ENST00000497298 483 ntBASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.9□□□□□ -1.79
CSNK1G3Q9Y6M4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms