Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 U3.29-201ENST00000391296 212 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 U3.30-201ENST00000391308 210 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR1302-8-201ENST00000408342 128 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 HMGB1P11-201ENST00000413899 637 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AL590139.1-201ENST00000416267 400 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 RGS17P1-201ENST00000423358 553 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 EIF4HP2-201ENST00000424380 563 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 OR2B7P-201ENST00000429302 934 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 NRBF2P3-201ENST00000432731 865 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 RPS17P8-201ENST00000434525 335 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 SDCBPP1-201ENST00000440192 890 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MTND1P30-201ENST00000441241 901 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 BX322784.1-201ENST00000455793 1077 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC092754.2-201ENST00000463506 460 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC020890.1-201ENST00000491837 504 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC106872.3-201ENST00000495104 446 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC093853.1-201ENST00000515689 483 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 RN7SKP276-201ENST00000516242 268 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC106038.2-201ENST00000520706 568 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MTCO1P49-201ENST00000523429 802 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC024224.1-201ENST00000538284 609 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AL121766.1-201ENST00000547436 487 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC141257.3-201ENST00000572906 215 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AF131215.7-201ENST00000602443 707 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 OR6R2P-201ENST00000609216 300 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC106028.5-201ENST00000610332 395 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR6748-201ENST00000610433 71 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC073530.2-201ENST00000623987 261 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC107068.1-201ENST00000563286 4218 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC093591.2-201ENST00000565254 3843 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 ELL2P3-201ENST00000457883 1602 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-660P-201ENST00000364566 109 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 RPL36AP10-201ENST00000421785 322 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC002381.1-201ENST00000447049 280 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 MTCO1P27-201ENST00000448269 226 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC006967.1-201ENST00000467608 589 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC011005.3-201ENST00000491624 395 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 IGKV1-32-201ENST00000519290 311 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC092851.1-201ENST00000535964 478 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 CR383656.6-201ENST00000550518 394 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 PCMTD1P2-201ENST00000565017 355 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC090615.1-201ENST00000577519 154 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC022726.1-201ENST00000587475 207 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC110760.3-201ENST00000598794 467 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 WISP1-OT1-201ENST00000602893 642 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 FAM27B-201ENST00000610601 213 ntBASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A3BPQ9Y5P4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
COL4A3BPQ9Y5P4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms